RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 E2F7Q96AV8 911 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 TXNDC15Q96J42 360 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 FERD3LQ96RJ6 166 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM118BQ9BPY3 351 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ECSITQ9BQ95 431 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAIM2Q9BWQ8 316 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 TEX13BQ9BXU2 312 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 DPY30Q9C005 99 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 EPHX3Q9H6B9 360 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 RNF167Q9H6Y7 350 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 KAT8Q9H7Z6 458 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 DCLRE1BQ9H816 532 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PCDH9Q9HC56 1237 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 B3GAT2Q9NPZ5 323 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 MIEF1Q9NQG6 463 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 EIF2B3Q9NR50 452 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 STARD5Q9NSY2 213 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZCCHC3Q9NUD5 404 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM105AQ9NUU6 356 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 GDAP2Q9NXN4 497 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CDKN2AIPQ9NXV6 580 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 NTMQ9P121 344 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 DSEQ9UL01 958 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 RIMKLBQ9ULI2 386 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PSMD13Q9UNM6 376 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 FLGP20930 4061 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 MAGEB16A2A368 324 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 OR2A25A4D2G3 310 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 HTR3EA5X5Y0 456 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 OR14I1A6ND48 311 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 POM121CA8CG34 1229 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 MEN1O00255 615 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PPP1R2P9O14990 202 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 KPNA5O15131 536 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CREBL2O60519 120 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 GALR3O60755 368 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CCDC22O60826 627 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CSPG5O95196 566 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ACSL3O95573 720 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CHRNA1P02708 482 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 DBIP07108 87 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 KLK3P07288 261 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 MYL3P08590 195 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZGLP1P0C6A0 271 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SP9P0CG40 484 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 NR2F1P10589 423 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 UBL4AP11441 157 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ETS2P15036 469 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 KCNE1P15382 129 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 HOXB6P17509 224 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 TGM2P21980 687 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 S100A2P29034 98 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 HIBADHP31937 336 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 RORAP35398 523 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 RPL3P39023 403 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 FEN1P39748 380 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC1A1P43005 524 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PPP3CCP48454 512 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CDK9P50750 372 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 RAB9AP51151 201 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 DUSP3P51452 185 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 AP3M2P53677 418 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 AP2S1P53680 142 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 NAGLUP54802 743 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ATP6V0D1P61421 351 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 OC90Q02509 493 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CREMQ03060 361 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 FPGSQ05932 587 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SPOCK1Q08629 439 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ECH1Q13011 328 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 TMED1Q13445 227 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PDE7AQ13946 482 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 DSG2Q14126 1118 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CALCRLQ16602 461 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CTXN3Q4LDR2 81 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PAN2Q504Q3 1202 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 GPAT3Q53EU6 434 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 MDH1BQ5I0G3 518 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM69BQ5VUD6 431 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CD276Q5ZPR3 534 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 TRIQKQ629K1 86 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 HEATR6Q6AI08 1181 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 MZT2BQ6NZ67 158 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 TAF2Q6P1X5 1199 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZC3H14Q6PJT7 736 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 LINC00114Q6XXX2 140 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 LRRC74BQ6ZQY2 392 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 QSOX2Q6ZRP7 698 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 RPS27LQ71UM5 84 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 MRPL21Q7Z2W9 205 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 P4HA3Q7Z4N8 544 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 AMIGO1Q86WK6 493 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 TMEM17Q86X19 198 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 GATAD2AQ86YP4 633 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 HPS6Q86YV9 775 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SYT12Q8IV01 421 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 LACC1Q8IV20 430 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SAMD14Q8IZD0 417 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SPARTQ8N0X7 666 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PYROXD2Q8N2H3 581 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms