RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 SPG11Q96JI7 2443 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 A0A1W2PR48 441 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 GLOD5A6NK44 160 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 H0YIV9 168 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 HS6ST1O60243 411 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 KRT38O76015 456 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 NADKO95544 446 aaPredicted RBP10.09□□□□□ -0.79
RNF4-212ENST00000509258 IGKV3-11P04433 115 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 GFAPP14136 432 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 IGFBP2P18065 325 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 TSPAN8P19075 237 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 CPN2P22792 545 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 CHRNB4P30926 498 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 RNF4P78317 190 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 TNFRSF17Q02223 184 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 PLGLB1Q02325 96 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 FOLH1Q04609 750 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 TRAF3Q13114 568 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 SERTAD2Q14140 314 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 CPSF6Q16630 551 aaKnown RBP eCLIP10.09□□□□□ -0.79
RNF4-212ENST00000509258 HIST2H2ACQ16777 129 aaPredicted RBP10.09□□□□□ -0.79
RNF4-212ENST00000509258 FAM83EQ2M2I3 478 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 AP5B1Q2VPB7 878 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 TMEM35AQ53FP2 167 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 HIST2H2AA3Q6FI13 130 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 ADGRD1Q6QNK2 874 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 GK5Q6ZS86 529 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 ACAD11Q709F0 780 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 MYLK4Q86YV6 388 aaPredicted RBP10.09□□□□□ -0.79
RNF4-212ENST00000509258 C9orf40Q8IXQ3 194 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 MMP21Q8N119 569 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 L3MBTL4Q8NA19 623 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 ZFP62Q8NB50 900 aaPredicted RBP10.09□□□□□ -0.79
RNF4-212ENST00000509258 PSD4Q8NDX1 1056 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 OR5L2Q8NGL0 311 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 RND1Q92730 232 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 PHF21BQ96EK2 531 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 CMTM7Q96FZ5 175 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 SCYL1Q96KG9 808 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 NOL11Q9H8H0 719 aaKnown RBP10.09□□□□□ -0.79
RNF4-212ENST00000509258 IPPKQ9H8X2 491 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 ACTR8Q9H981 624 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 SEMA4BQ9NPR2 832 aaPredicted RBP10.09□□□□□ -0.79
RNF4-212ENST00000509258 RYDENQ9NUL5 291 aaKnown RBP10.09□□□□□ -0.79
RNF4-212ENST00000509258 XPR1Q9UBH6 696 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 ZNF225Q9UK10 706 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 PCTPQ9UKL6 214 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 TSC22D4Q9Y3Q8 395 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 LIPGQ9Y5X9 500 aa10.09□□□□□ -0.79
RNF4-212ENST00000509258 TRIM49D1C9J1S8 452 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 POC1B-GALNT4F8VUJ3 575 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 PROM1O43490 865 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 DYRK3O43781 588 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 PDE9AO76083 593 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 AIFM1O95831 613 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 CCL3P10147 92 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 CD1EP15812 388 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 TNNI3P19429 210 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 PIK3CBP42338 1070 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 STT3AP46977 705 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 STX4Q12846 297 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 EMC4Q5J8M3 183 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 NDUFAF5Q5TEU4 345 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 HSDL2Q6YN16 418 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 CEP128Q6ZU80 1094 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 GPR180Q86V85 440 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 SLC22A16Q86VW1 577 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 ZCCHC7Q8N3Z6 543 aaKnown RBP10.08□□□□□ -0.8
RNF4-212ENST00000509258 MORN4Q8NDC4 146 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 OR14A16Q8NHC5 309 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 UBE2E3Q969T4 207 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 RGMAQ96B86 450 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 FMO2Q99518 471 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 DEFB127Q9H1M4 99 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 EPB41L4BQ9H329 900 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 RPF2Q9H7B2 306 aaKnown RBP10.08□□□□□ -0.8
RNF4-212ENST00000509258 PROK2Q9HC23 129 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 NPDC1Q9NQX5 325 aaPredicted RBP10.08□□□□□ -0.8
RNF4-212ENST00000509258 PLSCR2Q9NRY7 297 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 FARSBQ9NSD9 589 aaKnown RBP10.08□□□□□ -0.8
RNF4-212ENST00000509258 TEX10Q9NXF1 929 aaPredicted RBP10.08□□□□□ -0.8
RNF4-212ENST00000509258 COPS7AQ9UBW8 275 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 ANGPTL3Q9Y5C1 460 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 MED13LQ71F56 2210 aa10.08□□□□□ -0.8
RNF4-212ENST00000509258 ITPR3Q14573 2671 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 OR14I1A6ND48 311 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 FIGNL2A6NMB9 653 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 FAM90A27PA6NNH2 459 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 SYCE1LA8MT33 242 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 FAM166BA8MTA8 275 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 FAM47E-STBD1D6RA91 191 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 BCKDKO14874 412 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 PGRMC2O15173 223 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 GLSO94925 669 aaPredicted RBP10.07□□□□□ -0.8
RNF4-212ENST00000509258 LRATO95237 230 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 RPS17P08708 135 aaKnown RBP10.07□□□□□ -0.8
RNF4-212ENST00000509258 CELA3AP09093 270 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 CT62P0C5K7 136 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 FAM153BP0C7A2 387 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 COX7A2P14406 83 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms