RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 PTBP2Q9UKA9 531 aaKnown RBP12.8□□□□□ -0.36
VARS-226ENST00000483275 ERVK-19Q9WJR5 959 aa12.8□□□□□ -0.36
VARS-226ENST00000483275 CHCHD2Q9Y6H1 151 aaPredicted RBP12.8□□□□□ -0.36
VARS-226ENST00000483275 C15orf38-AP3S2A0A0A6YYH1 394 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 SUPT3HB4E1H0 165 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 E7ESA3 106 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 UBXN8O00124 270 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 SUPT3HO75486 399 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 HOXB4P17483 251 aaPredicted RBP12.79□□□□□ -0.36
VARS-226ENST00000483275 TCP1P17987 556 aaKnown RBP12.79□□□□□ -0.36
VARS-226ENST00000483275 HPDP32754 393 aaPredicted RBP12.79□□□□□ -0.36
VARS-226ENST00000483275 IGLV3-21P80748 117 aaPredicted RBP12.79□□□□□ -0.36
VARS-226ENST00000483275 FOXD4Q12950 439 aaPredicted RBP12.79□□□□□ -0.36
VARS-226ENST00000483275 SLAMF1Q13291 335 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 ZNF267Q14586 743 aaPredicted RBP12.79□□□□□ -0.36
VARS-226ENST00000483275 MPEG1Q2M385 716 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 HYAL4Q2M3T9 481 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 AP5B1Q2VPB7 878 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 PAGE2BQ5JRK9 111 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 RIPPLY2Q5TAB7 128 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 KHDRBS2Q5VWX1 349 aaKnown RBP12.79□□□□□ -0.36
VARS-226ENST00000483275 SLC22A10Q63ZE4 541 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 MYLK4Q86YV6 388 aaPredicted RBP12.79□□□□□ -0.36
VARS-226ENST00000483275 FBXW8Q8N3Y1 598 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 TNIP2Q8NFZ5 429 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 SLC22A8Q8TCC7 542 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 RMND5BQ96G75 393 aaPredicted RBP12.79□□□□□ -0.36
VARS-226ENST00000483275 MTERF1Q99551 399 aaKnown RBP12.79□□□□□ -0.36
VARS-226ENST00000483275 GPR22Q99680 433 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 RBBP8Q99708 897 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 CAPS2Q9BXY5 557 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 CD244Q9BZW8 370 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 WWTR1Q9GZV5 400 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 DPH5Q9H2P9 285 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 ZFP64Q9NPA5 681 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 SAYSD1Q9NPB0 183 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 DMRT3Q9NQL9 472 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 PYCARDQ9ULZ3 195 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 BOKQ9UMX3 212 aaPredicted RBP12.79□□□□□ -0.36
VARS-226ENST00000483275 SPACA6W5XKT8 324 aa12.79□□□□□ -0.36
VARS-226ENST00000483275 LRRC14BA6NHZ5 514 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 EFCAB8A8MWE9 144 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 PLPP1O14494 284 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 HCN1O60741 890 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 EEDO75530 441 aaKnown RBP12.78□□□□□ -0.36
VARS-226ENST00000483275 SCELO95171 688 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 CLPSP04118 112 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 FBXO45P0C2W1 286 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 STMN1P16949 149 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 GDF1P27539 372 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 RAP1GDS1P52306 607 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 AGFG1P52594 562 aaKnown RBP12.78□□□□□ -0.36
VARS-226ENST00000483275 PLIN5Q00G26 463 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 TNFRSF17Q02223 184 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 SLMAPQ14BN4 828 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 HIST2H2ACQ16777 129 aaPredicted RBP12.78□□□□□ -0.36
VARS-226ENST00000483275 ACSF3Q4G176 576 aaPredicted RBP12.78□□□□□ -0.36
VARS-226ENST00000483275 HIST2H2AA3Q6FI13 130 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 MED27Q6P2C8 311 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 SYDE1Q6ZW31 735 aaPredicted RBP12.78□□□□□ -0.36
VARS-226ENST00000483275 LRRC70Q7Z2Q7 622 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 CDC20BQ86Y33 519 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 CREG2Q8IUH2 290 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 MMP21Q8N119 569 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 LIX1Q8N485 282 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 BBOF1Q8ND07 529 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 MYRIPQ8NFW9 859 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 OR7G3Q8NG95 312 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 NEIL3Q8TAT5 605 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 NUBPLQ8TB37 319 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 PAQR8Q8TEZ7 354 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 TSPAN17Q96FV3 270 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 FBXL20Q96IG2 436 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 NAPGQ99747 312 aaPredicted RBP12.78□□□□□ -0.36
VARS-226ENST00000483275 FOXC2Q99958 501 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 SH3GL2Q99962 352 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 DOHHQ9BU89 302 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 ROGDIQ9GZN7 287 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 CXXC4Q9H2H0 198 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 RPF2Q9H7B2 306 aaKnown RBP12.78□□□□□ -0.36
VARS-226ENST00000483275 RASSF1Q9NS23 344 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 NSMCE4AQ9NXX6 385 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 CNOT11Q9UKZ1 510 aaKnown RBP12.78□□□□□ -0.36
VARS-226ENST00000483275 CBLCQ9ULV8 474 aa12.78□□□□□ -0.36
VARS-226ENST00000483275 TCRBV9S1A1TA0A576 114 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 PROM1O43490 865 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 TMPRSS11DO60235 418 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 GBAP04062 536 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 ALOX15P16050 662 aaPredicted RBP12.77□□□□□ -0.37
VARS-226ENST00000483275 TACR1P25103 407 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 SSTR4P31391 388 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 FBXW4P57775 412 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 ATP6V0D1P61421 351 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 PPP2R2AP63151 447 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 LAPTM5Q13571 262 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 EBPQ15125 230 aaKnown RBP12.77□□□□□ -0.37
VARS-226ENST00000483275 ZKSCAN8Q15776 578 aaPredicted RBP12.77□□□□□ -0.37
VARS-226ENST00000483275 TBCCQ15814 346 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 KRTAP21-3Q3LHN1 58 aa12.77□□□□□ -0.37
VARS-226ENST00000483275 TMEM35AQ53FP2 167 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms