RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 SLC35E2P0CK97 266 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 DRD2P14416 443 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 CD97P48960 835 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 GPR143P51810 404 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 XKP51811 444 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 ARG2P78540 354 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 MEP1AQ16819 746 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 CES4AQ5XG92 561 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 SLC48A1Q6P1K1 146 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 ATG14Q6ZNE5 492 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 KIF2BQ8N4N8 673 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 C16orf78Q8WTQ4 265 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 NCLNQ969V3 563 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 PNPLA2Q96AD5 504 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 PPWD1Q96BP3 646 aaKnown RBP19.51■□□□□ 0.71
SEC13-217ENST00000482647 DEFB126Q9BYW3 111 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 ILKAPQ9H0C8 392 aaPredicted RBP19.51■□□□□ 0.71
SEC13-217ENST00000482647 LRTM1Q9HBL6 345 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 PFDN4Q9NQP4 134 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 B3GNT3Q9Y2A9 372 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 DLGAP4Q9Y2H0 992 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.51■□□□□ 0.71
SEC13-217ENST00000482647 WBP11Q9Y2W2 641 aaKnown RBP19.51■□□□□ 0.71
SEC13-217ENST00000482647 PTGDR2Q9Y5Y4 395 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 SCN2AQ99250 2005 aa19.51■□□□□ 0.71
SEC13-217ENST00000482647 TRBV11-1A0A0K0K1C0 115 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 PIP5K1BO14986 540 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 ITM2AO43736 263 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 LYPLA1O75608 230 aaPredicted RBP19.5■□□□□ 0.71
SEC13-217ENST00000482647 IL3P08700 152 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 GALNSP34059 522 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 CASRP41180 1078 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 SLC1A6P48664 564 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 ALDH9A1P49189 494 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 HEPACAMQ14CZ8 416 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 FCRLBQ6BAA4 426 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 NOXRED1Q6NXP6 359 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 Q6ZSR9 355 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 RPS19BP1Q86WX3 136 aaKnown RBP19.5■□□□□ 0.71
SEC13-217ENST00000482647 CRLF3Q8IUI8 442 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 KIRREL3Q8IZU9 778 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 LGI4Q8N135 537 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 OR1N1Q8NGS0 311 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 HAS2Q92819 552 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 RIT1Q92963 219 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 SH3GL2Q99962 352 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 EBPLQ9BY08 206 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 OR8D2Q9GZM6 311 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 ABI3Q9P2A4 366 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 CES1P1Q9UKY3 287 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 RAP2CQ9Y3L5 183 aa19.5■□□□□ 0.71
SEC13-217ENST00000482647 ZFAND5O76080 213 aa19.49■□□□□ 0.71
SEC13-217ENST00000482647 ZNF763Q0D2J5 394 aa19.49■□□□□ 0.71
SEC13-217ENST00000482647 KIAA0040Q15053 153 aa19.49■□□□□ 0.71
SEC13-217ENST00000482647 NR6A1Q15406 480 aa19.49■□□□□ 0.71
SEC13-217ENST00000482647 SLC6A19Q695T7 634 aa19.49■□□□□ 0.71
SEC13-217ENST00000482647 PRICKLE2Q7Z3G6 844 aa19.49■□□□□ 0.71
SEC13-217ENST00000482647 ZNF605Q86T29 641 aa19.49■□□□□ 0.71
SEC13-217ENST00000482647 MMP21Q8N119 569 aa19.49■□□□□ 0.71
SEC13-217ENST00000482647 OR2T11Q8NH01 316 aa19.49■□□□□ 0.71
SEC13-217ENST00000482647 SLC2A12Q8TD20 617 aa19.49■□□□□ 0.71
SEC13-217ENST00000482647 SENP5Q96HI0 755 aaPredicted RBP19.49■□□□□ 0.71
SEC13-217ENST00000482647 RNF32Q9H0A6 362 aa19.49■□□□□ 0.71
SEC13-217ENST00000482647 CDCP1Q9H5V8 836 aa19.49■□□□□ 0.71
SEC13-217ENST00000482647 ZNF395Q9H8N7 513 aaPredicted RBP19.49■□□□□ 0.71
SEC13-217ENST00000482647 SLAMF7Q9NQ25 335 aa19.49■□□□□ 0.71
SEC13-217ENST00000482647 PLA2G3Q9NZ20 509 aa19.49■□□□□ 0.71
SEC13-217ENST00000482647 COPS7AQ9UBW8 275 aa19.49■□□□□ 0.71
SEC13-217ENST00000482647 POLR3HQ9Y535 204 aaPredicted RBP19.49■□□□□ 0.71
SEC13-217ENST00000482647 DDAH2O95865 285 aa19.48■□□□□ 0.71
SEC13-217ENST00000482647 WDPCPO95876 746 aa19.48■□□□□ 0.71
SEC13-217ENST00000482647 PORP16435 677 aaPredicted RBP19.48■□□□□ 0.71
SEC13-217ENST00000482647 CSNK2A2P19784 350 aaPredicted RBP19.48■□□□□ 0.71
SEC13-217ENST00000482647 RPL14P50914 215 aaKnown RBP19.48■□□□□ 0.71
SEC13-217ENST00000482647 TLR1Q15399 786 aa19.48■□□□□ 0.71
SEC13-217ENST00000482647 PLEKHN1Q494U1 663 aaPredicted RBP19.48■□□□□ 0.71
SEC13-217ENST00000482647 TTMPQ5BVD1 217 aa19.48■□□□□ 0.71
SEC13-217ENST00000482647 HSDL2Q6YN16 418 aa19.48■□□□□ 0.71
SEC13-217ENST00000482647 Q6ZS92 163 aa19.48■□□□□ 0.71
SEC13-217ENST00000482647 TRIM42Q8IWZ5 723 aa19.48■□□□□ 0.71
SEC13-217ENST00000482647 KLHL29Q96CT2 875 aa19.48■□□□□ 0.71
SEC13-217ENST00000482647 ART5Q96L15 291 aa19.48■□□□□ 0.71
SEC13-217ENST00000482647 HEY2Q9UBP5 337 aa19.48■□□□□ 0.71
SEC13-217ENST00000482647 TMED5Q9Y3A6 229 aa19.48■□□□□ 0.71
SEC13-217ENST00000482647 ZNF780BQ9Y6R6 833 aa19.48■□□□□ 0.71
SEC13-217ENST00000482647 ZNF462Q96JM2 2506 aa19.48■□□□□ 0.71
SEC13-217ENST00000482647 HMGB1P1B2RPK0 211 aaPredicted RBP19.47■□□□□ 0.71
SEC13-217ENST00000482647 CDK2AP1O14519 115 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 LSM1O15116 133 aaKnown RBP19.47■□□□□ 0.71
SEC13-217ENST00000482647 SLC28A2O43868 658 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 ERAL1O75616 437 aaKnown RBP19.47■□□□□ 0.71
SEC13-217ENST00000482647 CPMP14384 443 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 BST1Q10588 318 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 SPRED3Q2MJR0 410 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 COLEC12Q5KU26 742 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 ATG16L1Q676U5 607 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 DGAT2L6Q6ZPD8 337 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 IKBIPQ70UQ0 350 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 BEST3Q8N1M1 668 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 ZNF781Q8N8C0 355 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms