RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 Q6ZS92 163 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 Q6ZSR9 355 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 ARMC10Q8N2F6 343 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 C16orf78Q8WTQ4 265 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 UCN3Q969E3 161 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 ATP6V1G3Q96LB4 118 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 SH3GL2Q99962 352 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 PAIP2Q9BPZ3 127 aaKnown RBP14.26□□□□□ -0.13
SDC3-203ENST00000471567 DEFB126Q9BYW3 111 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 LRTM1Q9HBL6 345 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 PFDN4Q9NQP4 134 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 C1orf109Q9NX04 203 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 ABI3Q9P2A4 366 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 ZDHHC2Q9UIJ5 367 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 B3GNT3Q9Y2A9 372 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 DLGAP4Q9Y2H0 992 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 TMEM233B4DJY2 109 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 ITM2AO43736 263 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 OR10H2O60403 315 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 SEC22BO75396 215 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 DDAH2O95865 285 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 LINC00032P0C843 101 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 BGNP21810 368 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 SLC1A6P48664 564 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 CD97P48960 835 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 ZNF763Q0D2J5 394 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 STX3Q13277 289 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 HEPACAMQ14CZ8 416 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 KIAA0040Q15053 153 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 SPRED3Q2MJR0 410 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 CES4AQ5XG92 561 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 SLC6A19Q695T7 634 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 RPS19BP1Q86WX3 136 aaKnown RBP14.25□□□□□ -0.13
SDC3-203ENST00000471567 CRLF3Q8IUI8 442 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 DDIASQ8IXT1 998 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 KIF2BQ8N4N8 673 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 GOLGA6L1Q8N7Z2 621 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 OR1N1Q8NGS0 311 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 OR8K3Q8NH51 312 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 NCLNQ969V3 563 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 ART5Q96L15 291 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 MFRPQ9BY79 579 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 ILKAPQ9H0C8 392 aaPredicted RBP14.25□□□□□ -0.13
SDC3-203ENST00000471567 TMED5Q9Y3A6 229 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 RAP2CQ9Y3L5 183 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 CNTRLQ7Z7A1 2325 aa14.25□□□□□ -0.13
SDC3-203ENST00000471567 TRBV11-1A0A0K0K1C0 115 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 PIP5K1BO14986 540 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 LYPLA1O75608 230 aaPredicted RBP14.24□□□□□ -0.13
SDC3-203ENST00000471567 ZFAND5O76080 213 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 IL3P08700 152 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 CPMP14384 443 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 PORP16435 677 aaPredicted RBP14.24□□□□□ -0.13
SDC3-203ENST00000471567 XKP51811 444 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 MLF1P58340 268 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 ARG2P78540 354 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 TLR1Q15399 786 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 NR6A1Q15406 480 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 XKR7Q5GH72 579 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 NOXRED1Q6NXP6 359 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 ZNF605Q86T29 641 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 TRIM42Q8IWZ5 723 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 SAMD14Q8IZD0 417 aaPredicted RBP14.24□□□□□ -0.13
SDC3-203ENST00000471567 OR2T11Q8NH01 316 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.24□□□□□ -0.13
SDC3-203ENST00000471567 RAB3IL1Q8TBN0 382 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 AGR3Q8TD06 166 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 SLC2A12Q8TD20 617 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 RIT1Q92963 219 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 PPWD1Q96BP3 646 aaKnown RBP14.24□□□□□ -0.13
SDC3-203ENST00000471567 SENP5Q96HI0 755 aaPredicted RBP14.24□□□□□ -0.13
SDC3-203ENST00000471567 FCRL1Q96LA6 429 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 PPP3R2Q96LZ3 170 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 NPAS2Q99743 824 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 EBPLQ9BY08 206 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 OR8D2Q9GZM6 311 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 CDCP1Q9H5V8 836 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 MYNNQ9NPC7 610 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 EHD3Q9NZN3 535 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 HEY2Q9UBP5 337 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 COPS7AQ9UBW8 275 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 HAO1Q9UJM8 370 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 ZNF223Q9UK11 482 aaPredicted RBP14.24□□□□□ -0.13
SDC3-203ENST00000471567 PTGDR2Q9Y5Y4 395 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 BOD1L1Q8NFC6 3051 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 CFAP46Q8IYW2 2715 aa14.24□□□□□ -0.13
SDC3-203ENST00000471567 OR5H15A6NDH6 313 aa14.23□□□□□ -0.13
SDC3-203ENST00000471567 HMGB1P1B2RPK0 211 aaPredicted RBP14.23□□□□□ -0.13
SDC3-203ENST00000471567 LSM1O15116 133 aaKnown RBP14.23□□□□□ -0.13
SDC3-203ENST00000471567 SORBS2O94875 1100 aaKnown RBP14.23□□□□□ -0.13
SDC3-203ENST00000471567 WDPCPO95876 746 aa14.23□□□□□ -0.13
SDC3-203ENST00000471567 CSNK2A2P19784 350 aaPredicted RBP14.23□□□□□ -0.13
SDC3-203ENST00000471567 ALDH9A1P49189 494 aa14.23□□□□□ -0.13
SDC3-203ENST00000471567 BST1Q10588 318 aa14.23□□□□□ -0.13
SDC3-203ENST00000471567 PLEKHN1Q494U1 663 aaPredicted RBP14.23□□□□□ -0.13
SDC3-203ENST00000471567 TTMPQ5BVD1 217 aa14.23□□□□□ -0.13
SDC3-203ENST00000471567 ATG16L1Q676U5 607 aa14.23□□□□□ -0.13
SDC3-203ENST00000471567 FCRLBQ6BAA4 426 aa14.23□□□□□ -0.13
SDC3-203ENST00000471567 HSDL2Q6YN16 418 aa14.23□□□□□ -0.13
SDC3-203ENST00000471567 IKBIPQ70UQ0 350 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms