RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 ZNF681Q96N22 645 aa17.69■□□□□ 0.42
LMNB1-204ENST00000463908 ARHGAP9Q9BRR9 750 aa17.69■□□□□ 0.42
LMNB1-204ENST00000463908 NUDT9Q9BW91 350 aa17.69■□□□□ 0.42
LMNB1-204ENST00000463908 FAIM2Q9BWQ8 316 aa17.69■□□□□ 0.42
LMNB1-204ENST00000463908 ZNF552Q9H707 407 aaPredicted RBP17.69■□□□□ 0.42
LMNB1-204ENST00000463908 MYNNQ9NPC7 610 aa17.69■□□□□ 0.42
LMNB1-204ENST00000463908 ADAP2Q9NPF8 381 aa17.69■□□□□ 0.42
LMNB1-204ENST00000463908 PFDN4Q9NQP4 134 aa17.69■□□□□ 0.42
LMNB1-204ENST00000463908 PPIEQ9UNP9 301 aaKnown RBP17.69■□□□□ 0.42
LMNB1-204ENST00000463908 WBP11Q9Y2W2 641 aaKnown RBP17.69■□□□□ 0.42
LMNB1-204ENST00000463908 SDHDO14521 159 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 PDGFAP04085 211 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 SLC35E2P0CK97 266 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 ALOX15P16050 662 aaPredicted RBP17.68■□□□□ 0.42
LMNB1-204ENST00000463908 ITGA3P26006 1051 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 PIK3R1P27986 724 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 GSTM5P46439 218 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 ALDH9A1P49189 494 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 EMX2Q04743 252 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 DUSP2Q05923 314 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 KCNAB2Q13303 367 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 LY6DQ14210 128 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 MYBPC3Q14896 1274 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 HEPACAMQ14CZ8 416 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 IL23RQ5VWK5 629 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 CRLF3Q8IUI8 442 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 TMEM132CQ8N3T6 1108 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 ELP5Q8TE02 316 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 DOK4Q8TEW6 326 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 CNRIP1Q96F85 164 aaPredicted RBP17.68■□□□□ 0.42
LMNB1-204ENST00000463908 RBM18Q96H35 190 aaKnown RBP17.68■□□□□ 0.42
LMNB1-204ENST00000463908 C1orf50Q9BV19 199 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 LHPPQ9H008 270 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 WDR55Q9H6Y2 383 aaPredicted RBP17.68■□□□□ 0.42
LMNB1-204ENST00000463908 MMP25Q9NPA2 562 aa17.68■□□□□ 0.42
LMNB1-204ENST00000463908 C17orf105B2RV13 164 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 SLCO1B7G3V0H7 640 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 DDAH2O95865 285 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 TNNI3P19429 210 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 DDCP20711 480 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 TERF2Q15554 542 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 EXT1Q16394 746 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 ST13P4Q8IZP2 240 aaPredicted RBP17.67■□□□□ 0.42
LMNB1-204ENST00000463908 KIF2BQ8N4N8 673 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 ARFGAP2Q8N6H7 521 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 ZNF321PQ8N8H1 164 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 FNDC5Q8NAU1 212 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 APCDD1LQ8NCL9 501 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 C7orf57Q8NEG2 295 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 B3GNT7Q8NFL0 401 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 CDC26Q8NHZ8 85 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 DGAT2Q96PD7 388 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 TSSK3Q96PN8 268 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 UBL7Q96S82 380 aaPredicted RBP17.67■□□□□ 0.42
LMNB1-204ENST00000463908 SLC25A23Q9BV35 468 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 ADNPQ9H2P0 1102 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 TAS2R7Q9NYW3 318 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 TUBD1Q9UJT1 453 aa17.67■□□□□ 0.42
LMNB1-204ENST00000463908 ZNF223Q9UK11 482 aaPredicted RBP17.67■□□□□ 0.42
LMNB1-204ENST00000463908 PCDHGA9Q9Y5G4 932 aaKnown RBP17.67■□□□□ 0.42
LMNB1-204ENST00000463908 SYNDIG1LA6NDD5 238 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 EIF4E1BA6NMX2 242 aaKnown RBP17.66■□□□□ 0.42
LMNB1-204ENST00000463908 MKRN2OSH3BPM6 223 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 HRKO00198 91 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 ERAL1O75616 437 aaKnown RBP17.66■□□□□ 0.42
LMNB1-204ENST00000463908 CPMP14384 443 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 SOX18P35713 384 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 FEN1P39748 380 aaKnown RBP17.66■□□□□ 0.42
LMNB1-204ENST00000463908 SMU1Q2TAY7 513 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 SLC9B1Q4ZJI4 515 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 H3F3CQ6NXT2 135 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 FAM47EQ6ZV65 393 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 IKBIPQ70UQ0 350 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 TICAM1Q8IUC6 712 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 LIX1Q8N485 282 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 CLHC1Q8NHS4 586 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 BRIX1Q8TDN6 353 aaKnown RBP17.66■□□□□ 0.42
LMNB1-204ENST00000463908 NUDT8Q8WV74 236 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 GFM2Q969S9 779 aaKnown RBP17.66■□□□□ 0.42
LMNB1-204ENST00000463908 EXOSC8Q96B26 276 aaKnown RBP17.66■□□□□ 0.42
LMNB1-204ENST00000463908 KLHL29Q96CT2 875 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 SMAD5Q99717 465 aaKnown RBP17.66■□□□□ 0.42
LMNB1-204ENST00000463908 SEMA4CQ9C0C4 833 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 ZBTB20Q9HC78 741 aaPredicted RBP17.66■□□□□ 0.42
LMNB1-204ENST00000463908 GPR83Q9NYM4 423 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 EHD3Q9NZN3 535 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 UTS2RQ9UKP6 389 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 PSME2Q9UL46 239 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 CLCA3PQ9Y6N3 262 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 USH1CQ9Y6N9 552 aa17.66■□□□□ 0.42
LMNB1-204ENST00000463908 GOLGA8QA0A0J9YX86 632 aa17.65■□□□□ 0.42
LMNB1-204ENST00000463908 GOLGA8OA6NCC3 632 aa17.65■□□□□ 0.42
LMNB1-204ENST00000463908 TRPC5OSA6NMA1 111 aa17.65■□□□□ 0.42
LMNB1-204ENST00000463908 GOLGA8NF8WBI6 632 aa17.65■□□□□ 0.42
LMNB1-204ENST00000463908 ATXN7O15265 892 aaPredicted RBP17.65■□□□□ 0.42
LMNB1-204ENST00000463908 AKAP10O43572 662 aa17.65■□□□□ 0.42
LMNB1-204ENST00000463908 LRATO95237 230 aa17.65■□□□□ 0.42
LMNB1-204ENST00000463908 CT62P0C5K7 136 aa17.65■□□□□ 0.42
LMNB1-204ENST00000463908 PORP16435 677 aaPredicted RBP17.65■□□□□ 0.42
LMNB1-204ENST00000463908 CSNK2A2P19784 350 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms