RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 TRAPPC2BP0DI82 140 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 DARSP14868 501 aaKnown RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 NPR3P17342 541 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 PTBP1P26599 531 aaKnown RBP eCLIP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 HLA-DMAP28067 261 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 STK19P49842 368 aaPredicted RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 H2BFSP57053 126 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 SRSF3P84103 164 aaKnown RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 RPE65Q16518 533 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 PLAG1Q6DJT9 500 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 DDX53Q86TM3 631 aaKnown RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 BBS7Q8IWZ6 715 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC34A3Q8N130 599 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 GDPD1Q8N9F7 314 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 OR8J3Q8NGG0 315 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 ASB12Q8WXK4 309 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 UCN3Q969E3 161 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 C16orf70Q9BSU1 422 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 GABARAPL3Q9BY60 117 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 MYOZ2Q9NPC6 264 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF277Q9NRM2 450 aaPredicted RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 PIM2Q9P1W9 311 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 TRMT6Q9UJA5 497 aaKnown RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 FABP12A6NFH5 140 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ADM5C9JUS6 153 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 CLIC1O00299 241 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 GPR171O14626 319 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 MATN3O15232 486 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 MOCS2O96007 188 aaPredicted RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 H2AFB1P0C5Y9 115 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 H2AFB2P0C5Z0 115 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 OR4Q2P0C623 313 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 RNF224P0DH78 156 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ELK1P19419 428 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 HOXD9P28356 352 aaPredicted RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 MAP2K3P46734 347 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 MC1RQ01726 317 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ABRQ12979 859 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 GANABQ14697 944 aaKnown RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 CCSMST1Q4G0I0 132 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 NOTUMQ6P988 496 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 CBLL1Q75N03 491 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 LRRC8DQ7L1W4 858 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC16A13Q7RTY0 426 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 OR2T35Q8NGX2 323 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 PPP1R2P1Q96PQ5 205 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 SEMA3CQ99985 751 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC6A17Q9H1V8 727 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 DLL4Q9NR61 685 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 TAS2R7Q9NYW3 318 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 GPR52Q9Y2T5 361 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 TPRKBQ9Y3C4 175 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 PRSS21Q9Y6M0 314 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 EP300Q09472 2414 aaPredicted RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 RALGAPA1Q6GYQ0 2036 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 A0A0G2JK05 382 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 FAM240BA0A1B0GVZ2 78 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 PLSCR5A0PG75 271 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 BET1O15155 118 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 POP7O75817 140 aaKnown RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 TNNC2P02585 160 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 C9P02748 559 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF286BP0CG31 522 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 TPD52P55327 224 aaPredicted RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 CLDN20P56880 219 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 RBP5P82980 135 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 HSF2Q03933 536 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 OR5M10Q6IEU7 315 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 XRRA1Q6P2D8 792 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF782Q6ZMW2 699 aaPredicted RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 RNF180Q86T96 592 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC9B2Q86UD5 537 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ADHFE1Q8IWW8 467 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF527Q8NB42 609 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 HGDQ93099 445 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 NTAN1Q96AB6 310 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 OTUB1Q96FW1 271 aaPredicted RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 TRIB3Q96RU7 358 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 NKX3-1Q99801 234 aaPredicted RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 CMSS1Q9BQ75 279 aaKnown RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 EBPLQ9BY08 206 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 DUSP16Q9BY84 665 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 POLR2J2Q9GZM3 115 aaKnown RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 GULP1Q9UBP9 304 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 PEX16Q9Y5Y5 336 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 HS3ST4Q9Y661 456 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 TRBV4-1A0A0J9YWV2 114 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 C1orf226A1L170 272 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ZAR1LA6NP61 321 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ISM1B1AKI9 464 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 C9JQL5 133 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 INMT-MINDY4F8WBC2 141 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 LYRM1O43325 122 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC2A4P14672 509 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ITGA1P56199 1179 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 RAD51Q06609 339 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 PLA2G7Q13093 441 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 ARHGAP15Q53QZ3 475 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 RAB41Q5JT25 222 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 FBXO47Q5MNV8 452 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms