RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 FAM72DQ6L9T8 149 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 DHRS11Q6UWP2 260 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 CEACAM20Q6UY09 585 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 RBMS3Q6XE24 437 aaKnown RBP3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 C17orf107Q6ZR85 190 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 Q6ZTC4 211 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 FAM72BQ86X60 149 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 APLFQ8IW19 511 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 ZNF843Q8N446 348 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 GBP7Q8N8V2 638 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 COLGALT1Q8NBJ5 622 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 METTL21AQ8WXB1 218 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 RLN3Q8WXF3 142 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 PIK3R3Q92569 461 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 HIST1H2ACQ93077 130 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 AZIN2Q96A70 460 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 TMEM45BQ96B21 275 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 BPIFA2Q96DR5 249 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 TCEANC2Q96MN5 208 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 S1PR3Q99500 378 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 CDCA3Q99618 268 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 PSD2Q9BQI7 771 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 ALG12Q9BV10 488 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 CAPS2Q9BXY5 557 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 RNF186Q9NXI6 227 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 OR6C2Q9NZP2 312 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 IL36AQ9UHA7 158 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 MRTO4Q9UKD2 239 aaKnown RBP3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 TCF19Q9Y242 345 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 R4GN57 208 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 MYH14Q7Z406 1995 aaKnown RBP3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 PTCH1Q13635 1447 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 ZMYM6O95789 1325 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 RAD54L2Q9Y4B4 1467 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 KDM6BO15054 1643 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 LOC101059948A0A1B0GTJ6 334 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 SMIM1B2RUZ4 78 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 H0Y8G0 127 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 CASQ2O14958 399 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 PRKRAO75569 313 aaKnown RBP3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 TXNDC12O95881 172 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 IGKV3-20P01619 116 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 IGHV4-31P0DP07 118 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 DARSP14868 501 aaKnown RBP3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 LGALS3BPQ08380 585 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 COX10Q12887 443 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 ITGA9Q13797 1035 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 MXD4Q14582 209 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 ZNF528Q3MIS6 628 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 XKR3Q5GH77 459 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 DCAF10Q5QP82 559 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 LYPLAL1Q5VWZ2 237 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 LIPJQ5W064 366 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 SLC27A4Q6P1M0 643 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 NIPAL3Q6P499 406 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 PAQR9Q6ZVX9 377 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 C5orf24Q7Z6I8 188 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 SLC22A16Q86VW1 577 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 ZC3H3Q8IXZ2 948 aaKnown RBP3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 STPG4Q8N801 248 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 MAPKAPK5-AS1Q8N8E1 139 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 OR10V1Q8NGI7 309 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 GIPC3Q8TF64 312 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 FBXO32Q969P5 355 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 PINX1Q96BK5 328 aaKnown RBP3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 SENP8Q96LD8 212 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 C4orf45Q96LM5 186 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 RAB40CQ96S21 281 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 EPYCQ99645 322 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 AGPAT1Q99943 283 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 CCDC77Q9BR77 488 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 OR2B2Q9GZK3 357 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 CALHM2Q9HA72 323 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 SLC52A3Q9NQ40 469 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 PLEK2Q9NYT0 353 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 C6orf203Q9P0P8 240 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 KLHL8Q9P2G9 620 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 ZNF490Q9ULM2 529 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 CLEC4AQ9UMR7 237 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 TOPBP1Q92547 1522 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 SYNJ1O43426 1573 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 KIF16BQ96L93 1317 aa3.93□□□□□ -1.78
HMGB1P48-201ENST00000446155 TRBV5-5A0A0J9YX44 114 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 PRR23AA6NEV1 266 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 SERINC4A6NH21 518 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 FAM47DPA6NHR8 397 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 PMS2P5A8MQ11 134 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 ARPC1BO15143 372 aaKnown RBP3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 DCXO43602 365 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 KRT86O43790 486 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 ERLIN1O75477 346 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 IL1BP01584 269 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 AMBPP02760 352 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 MT-ND2P03891 347 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 ATP1B1P05026 303 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 PRSS1P07477 247 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 CFC1BP0CG36 223 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 CFC1P0CG37 223 aa3.92□□□□□ -1.78
HMGB1P48-201ENST00000446155 CA8P35219 290 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms