RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 ZBTB20Q9HC78 741 aaPredicted RBP8.99□□□□□ -0.97
CUX1-206ENST00000437600 ZNF282Q9UDV7 671 aaPredicted RBP8.99□□□□□ -0.97
CUX1-206ENST00000437600 RGS10O43665 173 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 PI15O43692 258 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 PRMT3O60678 531 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 RNGTTO60942 597 aaKnown RBP8.99□□□□□ -0.97
CUX1-206ENST00000437600 CLPXO76031 633 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 INHBBP09529 407 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 CD36P16671 472 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 JUNBP17275 347 aaPredicted RBP8.99□□□□□ -0.97
CUX1-206ENST00000437600 LIM2P55344 173 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 ITGA1P56199 1179 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 RAB8AP61006 207 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 RPS3AP61247 264 aaKnown RBP8.99□□□□□ -0.97
CUX1-206ENST00000437600 EPS8Q12929 822 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 SYPL1Q16563 259 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 CARTPTQ16568 116 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 ZNF829Q3KNS6 432 aaPredicted RBP8.99□□□□□ -0.97
CUX1-206ENST00000437600 SPDYE7PQ495Y7 208 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 ERICH5Q6P6B1 374 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 TMEM92Q6UXU6 159 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 DEF8Q6ZN54 512 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 DCDC5Q6ZRR9 648 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 UTS2BQ765I0 119 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 PAGE2Q7Z2X7 111 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 TSPYL5Q86VY4 417 aaPredicted RBP8.99□□□□□ -0.97
CUX1-206ENST00000437600 FAM129CQ86XR2 697 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 LAS2Q8IYD9 372 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 CENPSQ8N2Z9 138 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 METTL4Q8N3J2 472 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 MAFAQ8NHW3 353 aaPredicted RBP8.99□□□□□ -0.97
CUX1-206ENST00000437600 CCL4L1Q8NHW4 92 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 RAB7BQ96AH8 199 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 TM4SF18Q96CE8 201 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 SIPA1Q96FS4 1042 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 RDH12Q96NR8 316 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 NECAB3Q96P71 396 aaPredicted RBP8.99□□□□□ -0.97
CUX1-206ENST00000437600 ZNF300Q96RE9 604 aaPredicted RBP8.99□□□□□ -0.97
CUX1-206ENST00000437600 APOL4Q9BPW4 351 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 TUBA1CQ9BQE3 449 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 COPS4Q9BT78 406 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 DUSP21Q9H596 190 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 ACOT13Q9NPJ3 140 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 ACER3Q9NUN7 267 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 PMF1-BGLAPU3KQ54 211 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 TRBV4-1A0A0J9YWV2 114 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.99□□□□□ -0.97
CUX1-206ENST00000437600 FFAR1O14842 300 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 AK4P27144 223 aaPredicted RBP8.99□□□□□ -0.97
CUX1-206ENST00000437600 IGFALSP35858 605 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 ARPC4P59998 168 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 PIN1Q13526 163 aaPredicted RBP8.99□□□□□ -0.97
CUX1-206ENST00000437600 DNASE1L3Q13609 305 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 DOC2BQ14184 412 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 KRT33BQ14525 404 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 MLF2Q15773 248 aaPredicted RBP8.99□□□□□ -0.97
CUX1-206ENST00000437600 TPRG1LQ5T0D9 272 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 ZNF765Q7L2R6 523 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 COMTD1Q86VU5 262 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 LACC1Q8IV20 430 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 TMEM145Q8NBT3 493 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 ZG16BQ96DA0 208 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 FOXQ1Q9C009 403 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 FGF22Q9HCT0 170 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 LHX9Q9NQ69 397 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 TRPC4Q9UBN4 977 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 AP3M1Q9Y2T2 418 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 TPRKBQ9Y3C4 175 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 COL4A2P08572 1712 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 PGRMC2O15173 223 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 VEGFDO43915 354 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 APOL3O95236 402 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 CCDC159P0C7I6 412 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 SLC35G4P0C7Q5 338 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 OR12D1P0DN82 309 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 PTX3P26022 381 aaPredicted RBP8.98□□□□□ -0.97
CUX1-206ENST00000437600 GRK5P34947 590 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 EIF2DP41214 584 aaKnown RBP8.98□□□□□ -0.97
CUX1-206ENST00000437600 CTSKP43235 329 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 IFITM3Q01628 133 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 MADCAM1Q13477 382 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 IFI44LQ53G44 452 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 DEPDC1Q5TB30 811 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 SDE2Q6IQ49 451 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 PDZD3Q86UT5 571 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 IGFN1Q86VF2 1251 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 GALNT13Q8IUC8 556 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 CCDC116Q8IYX3 515 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 PGBD3Q8N328 593 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 AQP11Q8NBQ7 271 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 OR52N2Q8NGI0 321 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 OR4D11Q8NGI4 311 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 HMGB4Q8WW32 186 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 BORCS5Q969J3 196 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 NEURL2Q9BR09 285 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 ZNF717Q9BY31 904 aaPredicted RBP8.98□□□□□ -0.97
CUX1-206ENST00000437600 C11orf16Q9NQ32 467 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 EQTNQ9NQ60 294 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 ENPP5Q9UJA9 477 aa8.98□□□□□ -0.97
CUX1-206ENST00000437600 FBXW2Q9UKT8 454 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms