RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 POPDC3Q9HBV1 291 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 NLGN3Q9NZ94 848 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 RPS6KB2Q9UBS0 482 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 AUP1Q9Y679 476 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 FKBP7Q9Y680 259 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 LOC285095A0A1B0GVY8 99 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 CD8B2A6NJW9 211 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 IRAK2O43187 625 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 CD8BP10966 210 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 ETFAP13804 333 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 RAB3AP20336 220 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 THPOP40225 353 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 GRIN2CQ14957 1233 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 SLC27A1Q6PCB7 646 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 CASP12Q6UXS9 341 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 GDPGP1Q6ZNW5 385 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 LHFPL3Q86UP9 236 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 MIB1Q86YT6 1006 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 FAM181AQ8N9Y4 354 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 SLC22A8Q8TCC7 542 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 UFD1Q92890 307 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 MND1Q9BWT6 205 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 C1QTNF3Q9BXJ4 246 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 NLNQ9BYT8 704 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 SHARPINQ9H0F6 387 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 ATP13A1Q9HD20 1204 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 STARD7Q9NQZ5 370 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 GSTK1Q9Y2Q3 226 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 PCDHGC4Q9Y5F7 938 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 PCDHGB7Q9Y5F8 929 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 C17orf102A2RUQ5 167 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 PDCD5O14737 125 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 TAPBPO15533 448 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 CD3GP09693 182 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 LAMP1P11279 417 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ETV5P41161 510 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 STK19P49842 368 aaPredicted RBP7.11□□□□□ -1.27
CPSF6-202ENST00000435070 PPP3R1P63098 170 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 RAET1GQ6H3X3 334 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 SLC25A24Q6NUK1 477 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 TMEM91Q6ZNR0 172 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 SERPINA11Q86U17 422 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ELMOD3Q96FG2 381 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ZFP3Q96NJ6 502 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 TMEM121BQ9BXQ6 578 aaPredicted RBP7.11□□□□□ -1.27
CPSF6-202ENST00000435070 NDUFB11Q9NX14 153 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 MRPL15Q9P015 296 aaKnown RBP7.11□□□□□ -1.27
CPSF6-202ENST00000435070 MLXQ9UH92 298 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 PRELID3BQ9Y3B1 194 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 DVL2O14641 736 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 YY2O15391 372 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 KLK8O60259 260 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 LPLP06858 475 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ZP3P21754 424 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 SOX18P35713 384 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 GSTM5P46439 218 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 EVX1P49640 407 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ACLYP53396 1101 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 FABP5Q01469 135 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ZNF33AQ06730 810 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 CAMK2DQ13557 499 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ZNF169Q14929 603 aaPredicted RBP7.11□□□□□ -1.27
CPSF6-202ENST00000435070 RETSATQ6NUM9 610 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ULK3Q6PHR2 472 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 CLDN22Q8N7P3 220 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 FAM46DQ8NEK8 389 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 MOSPD2Q8NHP6 518 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 CIPCQ9C0C6 399 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 MYOZ2Q9NPC6 264 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 CUEDC1Q9NWM3 386 aaPredicted RBP7.11□□□□□ -1.27
CPSF6-202ENST00000435070 NUDT4Q9NZJ9 180 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ACSL5Q9ULC5 683 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 FGF10O15520 208 aaPredicted RBP7.11□□□□□ -1.27
CPSF6-202ENST00000435070 BPIP17213 487 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 PSMA3P25788 255 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 MAPK1P28482 360 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 PBX3P40426 434 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 BDKRB1P46663 353 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 AFF1P51825 1210 aaKnown RBP7.11□□□□□ -1.27
CPSF6-202ENST00000435070 OPCMLQ14982 345 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ETFDHQ16134 617 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 KCNA10Q16322 511 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 DUOXA1Q1HG43 343 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 TTLL9Q3SXZ7 439 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 WASH2PQ6VEQ5 465 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ZNF614Q8N883 585 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ZNF527Q8NB42 609 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ATOH1Q92858 354 aaPredicted RBP7.11□□□□□ -1.27
CPSF6-202ENST00000435070 S100PBPQ96BU1 408 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 TBC1D20Q96BZ9 403 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 GHITMQ9H3K2 345 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ZCCHC4Q9H5U6 513 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 NANSQ9NR45 359 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 CNOT2Q9NZN8 540 aaKnown RBP7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ACSL6Q9UKU0 697 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 MEIS3P2A8K0S8 358 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 QSOX1O00391 747 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 OR10H3O60404 316 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ZNF623O75123 536 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ITGB7P26010 798 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms