RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 ANKRD11Q6UB99 2663 aaPredicted RBP12.61□□□□□ -0.39
PRPF39-202ENST00000424478 A0A1W2PRB8 838 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 TRABD2BA6NFA1 517 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 BRINP1O60477 761 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 PRMT3O60678 531 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 KLK3P07288 261 aaPredicted RBP12.61□□□□□ -0.39
PRPF39-202ENST00000424478 CT62P0C5K7 136 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 ACPPP15309 386 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 CLNS1AP54105 237 aaKnown RBP12.61□□□□□ -0.39
PRPF39-202ENST00000424478 PRKAG1P54619 331 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 MTPNP58546 118 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 STX4Q12846 297 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 NFYCQ13952 458 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 RABL3Q5HYI8 236 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 PRMT9Q6P2P2 845 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 FAM198BQ6UWH4 519 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 ZNF621Q6ZSS3 439 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 IKBIPQ70UQ0 350 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 OR4A15Q8NGL6 344 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 RP9Q8TA86 221 aaKnown RBP12.61□□□□□ -0.39
PRPF39-202ENST00000424478 COQ8BQ96D53 544 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 ZNF681Q96N22 645 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 SLC25A23Q9BV35 468 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 ALOXE3Q9BYJ1 711 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 PNO1Q9NRX1 252 aaKnown RBP12.61□□□□□ -0.39
PRPF39-202ENST00000424478 SLC25A37Q9NYZ2 338 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 SPACA6W5XKT8 324 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 IFNA16P05015 189 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 PGDP52209 483 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 RAB15P59190 212 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 BNIP1Q12981 228 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 TMEM164Q5U3C3 297 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 OR52E8Q6IFG1 317 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 ANGPTL8Q6UXH0 198 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 MSRB3Q8IXL7 192 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 ZNF321PQ8N8H1 164 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 ENDOVQ8N8Q3 282 aaKnown RBP12.61□□□□□ -0.39
PRPF39-202ENST00000424478 FAM156AQ8NDB6 213 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 OR4K14Q8NGD5 310 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 CMTM5Q96DZ9 223 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 AMDHD1Q96NU7 426 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 YIPF4Q9BSR8 244 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 CXorf36Q9H7Y0 433 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 PRRC2CQ9Y520 2896 aaKnown RBP12.61□□□□□ -0.39
PRPF39-202ENST00000424478 TMX2-CTNND1H3BSU7 103 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 IL6P05231 212 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 OCA2Q04671 838 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 EXOSC7Q15024 291 aaKnown RBP12.6□□□□□ -0.39
PRPF39-202ENST00000424478 NSDHLQ15738 373 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 TRMT12Q53H54 448 aaKnown RBP12.6□□□□□ -0.39
PRPF39-202ENST00000424478 C6orf15Q6UXA7 325 aaPredicted RBP12.6□□□□□ -0.39
PRPF39-202ENST00000424478 ZNF771Q7L3S4 317 aaPredicted RBP12.6□□□□□ -0.39
PRPF39-202ENST00000424478 VASH2Q86V25 355 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 CT55Q8WUE5 264 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 SLC7A6OSQ96CW6 309 aaPredicted RBP12.6□□□□□ -0.39
PRPF39-202ENST00000424478 MVB12AQ96EY5 273 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 SPSB2Q99619 263 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 EQTNQ9NQ60 294 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 ENTPD4Q9Y227 616 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 PTRH2Q9Y3E5 179 aaKnown RBP12.6□□□□□ -0.39
PRPF39-202ENST00000424478 NEUROG3Q9Y4Z2 214 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 PCDHB14Q9Y5E9 798 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 ZNF780BQ9Y6R6 833 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 CNTRLQ7Z7A1 2325 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 IDSB3KWA1 339 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 RFXANKO14593 260 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 ANP32DO95626 131 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 RECKO95980 971 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 DRD2P14416 443 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 NT5EP21589 574 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 GPC1P35052 558 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 SOX18P35713 384 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 MC3RP41968 323 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 EMP3P54852 163 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 PCBP4P57723 403 aaKnown RBP12.6□□□□□ -0.39
PRPF39-202ENST00000424478 TRA2BP62995 288 aaKnown RBP12.6□□□□□ -0.39
PRPF39-202ENST00000424478 CAMK2BQ13554 666 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 KRT72Q14CN4 511 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 OVCH1Q7RTY7 1134 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 GALNT15Q8N3T1 639 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 OR8J2Q8NGG1 315 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 PRPF18Q99633 342 aaKnown RBP12.6□□□□□ -0.39
PRPF39-202ENST00000424478 NPLQ9BXD5 320 aaPredicted RBP12.6□□□□□ -0.39
PRPF39-202ENST00000424478 TRIM4Q9C037 500 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 CACNA1AO00555 2505 aa12.6□□□□□ -0.39
PRPF39-202ENST00000424478 FXYD1O00168 92 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 NVLO15381 856 aaKnown RBP12.59□□□□□ -0.39
PRPF39-202ENST00000424478 GUCY1B2O75343 617 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 GPR75O95800 540 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 AGXTP21549 392 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 ARFIP1P53367 373 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 SKP1P63208 163 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 SRSF11Q05519 484 aaKnown RBP12.59□□□□□ -0.39
PRPF39-202ENST00000424478 EIF3IQ13347 325 aaKnown RBP12.59□□□□□ -0.39
PRPF39-202ENST00000424478 DLEU7Q6UYE1 221 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 R3HCC1LQ7Z5L2 792 aaKnown RBP12.59□□□□□ -0.39
PRPF39-202ENST00000424478 DHDDSQ86SQ9 333 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 GLB1L3Q8NCI6 653 aaPredicted RBP12.59□□□□□ -0.39
PRPF39-202ENST00000424478 DDA1Q9BW61 102 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 ASCL3Q9NQ33 180 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms