RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 GNRHR2Q96P88 292 aa7.44□□□□□ -1.22
VIM-202ENST00000421459 DGAT2Q96PD7 388 aa7.44□□□□□ -1.22
VIM-202ENST00000421459 KCNC2Q96PR1 638 aa7.44□□□□□ -1.22
VIM-202ENST00000421459 TIMP4Q99727 224 aa7.44□□□□□ -1.22
VIM-202ENST00000421459 TBCDQ9BTW9 1192 aa7.44□□□□□ -1.22
VIM-202ENST00000421459 ERVK-6Q9BXR3 956 aa7.44□□□□□ -1.22
VIM-202ENST00000421459 CAPS2Q9BXY5 557 aa7.44□□□□□ -1.22
VIM-202ENST00000421459 DERL2Q9GZP9 239 aa7.44□□□□□ -1.22
VIM-202ENST00000421459 RHOJQ9H4E5 214 aa7.44□□□□□ -1.22
VIM-202ENST00000421459 RPF2Q9H7B2 306 aaKnown RBP7.44□□□□□ -1.22
VIM-202ENST00000421459 GPRC5BQ9NZH0 403 aa7.44□□□□□ -1.22
VIM-202ENST00000421459 COPS7AQ9UBW8 275 aa7.44□□□□□ -1.22
VIM-202ENST00000421459 PTBP2Q9UKA9 531 aaKnown RBP7.44□□□□□ -1.22
VIM-202ENST00000421459 ERVK-19Q9WJR5 959 aa7.44□□□□□ -1.22
VIM-202ENST00000421459 A0A1W2PPR1 153 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 C2orf72A6NCS6 295 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 LRRC14BA6NHZ5 514 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 HSPB2A8KAH6 182 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 TRIM3O75382 744 aaPredicted RBP7.43□□□□□ -1.22
VIM-202ENST00000421459 EEDO75530 441 aaKnown RBP7.43□□□□□ -1.22
VIM-202ENST00000421459 TRAPPC6AO75865 159 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 SEC31AO94979 1220 aaKnown RBP7.43□□□□□ -1.22
VIM-202ENST00000421459 ATE1O95260 518 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 GBAP04062 536 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 FBXO45P0C2W1 286 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 CT62P0C5K7 136 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 GABRA1P14867 456 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 ALOX15P16050 662 aaPredicted RBP7.43□□□□□ -1.22
VIM-202ENST00000421459 GDF1P27539 372 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 GSTM2P28161 218 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 SSTR1P30872 391 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 SSTR4P31391 388 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 CEACAM8P31997 349 aaPredicted RBP7.43□□□□□ -1.22
VIM-202ENST00000421459 DEKP35659 375 aaKnown RBP7.43□□□□□ -1.22
VIM-202ENST00000421459 SOX18P35713 384 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 SLC12A2P55011 1212 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 FBXW4P57775 412 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 DR1Q01658 176 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 TGM3Q08188 693 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 CRYZQ08257 329 aaKnown RBP7.43□□□□□ -1.22
VIM-202ENST00000421459 RCN2Q14257 317 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 FRG1Q14331 258 aaKnown RBP7.43□□□□□ -1.22
VIM-202ENST00000421459 EBPQ15125 230 aaKnown RBP7.43□□□□□ -1.22
VIM-202ENST00000421459 HSPB2Q16082 182 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 HIST2H2ACQ16777 129 aaPredicted RBP7.43□□□□□ -1.22
VIM-202ENST00000421459 AP5B1Q2VPB7 878 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 ACSF3Q4G176 576 aaPredicted RBP7.43□□□□□ -1.22
VIM-202ENST00000421459 FLYWCH1Q4VC44 716 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 EIPR1Q53HC9 387 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 FNDC7Q5VTL7 733 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 FAM219BQ5XKK7 198 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 HIST2H2AA3Q6FI13 130 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 OR4C11Q6IEV9 310 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 SULT1C3Q6IMI6 304 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 CHSY3Q70JA7 882 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 ZBED8Q8IZ13 594 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 PRR22Q8IZ63 422 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 FBXW8Q8N3Y1 598 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 LIX1Q8N485 282 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 BBOF1Q8ND07 529 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 OR7G3Q8NG95 312 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 NUBPLQ8TB37 319 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 SLC22A8Q8TCC7 542 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 RNASE6Q93091 150 aaKnown RBP7.43□□□□□ -1.22
VIM-202ENST00000421459 TRIB1Q96RU8 372 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 KRT12Q99456 494 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 MTERF1Q99551 399 aaKnown RBP7.43□□□□□ -1.22
VIM-202ENST00000421459 DOHHQ9BU89 302 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 EFCAB11Q9BUY7 163 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 CD244Q9BZW8 370 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 PHACTR1Q9C0D0 580 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 WWTR1Q9GZV5 400 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 EHD1Q9H4M9 534 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 ALG9Q9H6U8 611 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 SLC24A3Q9HC58 644 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 ACKR4Q9NPB9 350 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 RNF112Q9ULX5 631 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 SNX24Q9Y343 169 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 SPG11Q96JI7 2443 aa7.43□□□□□ -1.22
VIM-202ENST00000421459 ZNF407Q9C0G0 2248 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 IQANK1A0A1B0GTG1 560 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 A0A1B0GTL3 188 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 A0A1W2PR48 441 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 E7ESA3 106 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 UBXN8O00124 270 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 PLPP1O14494 284 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 GNB5O14775 395 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 PGRMC2O15173 223 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 TMPRSS11DO60235 418 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 SCELO95171 688 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 EPPINO95925 133 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 C1QAP02745 245 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 COX7A2P14406 83 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 DRD2P14416 443 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 CASP2P42575 452 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 SLCO1A2P46721 670 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 RPL21P46778 160 aaKnown RBP7.42□□□□□ -1.22
VIM-202ENST00000421459 ASCL1P50553 236 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 NEK2P51955 445 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 SLC37A1P57057 533 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms