RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 PCDHGA3Q9Y5H0 932 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PLXNB3Q9ULL4 1909 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SNTNA6NMZ2 147 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SOD1P00441 154 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 OR12D1P0DN82 309 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 EPCAMP16422 314 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 GABRB1P18505 474 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CD72P21854 359 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ACADLP28330 430 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 BUD31P41223 144 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CLCNKAP51800 687 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CRISP3P54108 245 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PUM1Q14671 1186 aaKnown RBP eCLIP11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 BHLHB9Q6PI77 547 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 FAM83FQ8NEG4 500 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TM4SF18Q96CE8 201 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ZFYVE19Q96K21 471 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 FERD3LQ96RJ6 166 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PELI2Q9HAT8 420 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CUEDC1Q9NWM3 386 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 HAT1O14929 419 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 DSCR3O14972 297 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 NDUFS4O43181 175 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TLX2O43763 284 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 LILRB5O75023 590 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 EPHX1P07099 455 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SLC15A1P46059 708 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 LIM2P55344 173 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 DPTQ07507 201 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ILKQ13418 452 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ARHGAP19Q14CB8 494 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 MEDAGQ5VYS4 303 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SAXO2Q658L1 398 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 NXPE3Q969Y0 559 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TRNT1Q96Q11 434 aaKnown RBP11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 MS4A8Q9BY19 250 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ABCG4Q9H172 646 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 OR52A5Q9H2C5 316 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SNTG1Q9NSN8 517 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 FTSJ1Q9UET6 329 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SLC6A14Q9UN76 642 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 MFN2O95140 757 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 HNRNPA1P09651 372 aaKnown RBP eCLIP11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ELAVL4P26378 380 aaKnown RBP11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 VIPR2P41587 438 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CDC20Q12834 499 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PIN1Q13526 163 aaPredicted RBP11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 GNA13Q14344 377 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 NCF4Q15080 339 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TCTN3Q6NUS6 607 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CCBE1Q6UXH8 406 aaPredicted RBP11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 C11orf74Q86VG3 221 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 FAM129CQ86XR2 697 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 FLCNQ8NFG4 579 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 VWCEQ96DN2 955 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TREX2Q9BQ50 279 aaPredicted RBP11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 C17orf62Q9BQA9 187 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 BTBD2Q9BX70 525 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TSSK6Q9BXA6 273 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 DPP7Q9UHL4 492 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 IRAK3Q9Y616 596 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 NINQ8N4C6 2090 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TMEM221A6NGB7 291 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PRRT4C9JH25 899 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SOX3P41225 446 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 RORCP51449 518 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 GPAT3Q53EU6 434 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TMPRSS11AQ6ZMR5 421 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 USP30Q70CQ3 517 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 C12orf40Q86WS4 652 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TBC1D19Q8N5T2 526 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CACYBPQ9HB71 228 aaKnown RBP11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CTPS2Q9NRF8 586 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 INIPQ9NRY2 104 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 IMP3Q9NV31 184 aaKnown RBP11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SEC14L4Q9UDX3 406 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 LINC00854A0A1B0GVQ3 168 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CTDSP2O14595 271 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CYP7B1O75881 506 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TSPAN19P0C672 248 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CISD3P0C7P0 127 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PSMB5P28074 263 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 NCBP2P52298 156 aaKnown RBP eCLIP11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SNAPC1Q16533 368 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 C9orf64Q5T6V5 341 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 RSBN1Q5VWQ0 802 aaPredicted RBP11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 RTL10Q7L3V2 364 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 LRRC56Q8IYG6 542 aaPredicted RBP11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 OR5K2Q8NHB8 316 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TEX12Q9BXU0 123 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 OR51I1Q9H343 314 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ENTPD4Q9Y227 616 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CAB39Q9Y376 341 aaPredicted RBP11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PCM1Q15154 2024 aa11.1□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PAPLNO95428 1278 aa11.09□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SCG5P05408 212 aa11.09□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 NR2F6P10588 404 aa11.09□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PIPP12273 146 aaPredicted RBP11.09□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SLC6A11P48066 632 aa11.09□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 RHAGQ02094 409 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms