RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 PCDHA9Q9Y5H5 950 aa10.18□□□□□ -0.78
CHMP3-205ENST00000409810 TRAV17A0A0B4J275 112 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 OR5H15A6NDH6 313 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 GLOD5A6NK44 160 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 TTLL8A6PVC2 850 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 NPIPB8E9PQR5 432 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 ZFAND5O76080 213 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 SORBS2O94875 1100 aaKnown RBP10.17□□□□□ -0.78
CHMP3-205ENST00000409810 SLC35E2P0CK97 266 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 H2AFXP16104 143 aaPredicted RBP10.17□□□□□ -0.78
CHMP3-205ENST00000409810 GALNSP34059 522 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 ALDH9A1P49189 494 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 ZNF763Q0D2J5 394 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 ZNF169Q14929 603 aaPredicted RBP10.17□□□□□ -0.78
CHMP3-205ENST00000409810 NR6A1Q15406 480 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 SPRED3Q2MJR0 410 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 FAM219BQ5XKK7 198 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 FCRLBQ6BAA4 426 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 SLC48A1Q6P1K1 146 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 HSDL2Q6YN16 418 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 Q6ZS92 163 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 RPS19BP1Q86WX3 136 aaKnown RBP10.17□□□□□ -0.78
CHMP3-205ENST00000409810 CRLF3Q8IUI8 442 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 TRIM42Q8IWZ5 723 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 DDIASQ8IXT1 998 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 SAMD14Q8IZD0 417 aaPredicted RBP10.17□□□□□ -0.78
CHMP3-205ENST00000409810 BEST3Q8N1M1 668 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 KIF2BQ8N4N8 673 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 HORMAD2Q8N7B1 307 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 APCDD1LQ8NCL9 501 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 AGR3Q8TD06 166 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 SLC2A12Q8TD20 617 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 PTPMT1Q8WUK0 201 aaPredicted RBP10.17□□□□□ -0.78
CHMP3-205ENST00000409810 TM4SF18Q96CE8 201 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 EBPLQ9BY08 206 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 OR8D2Q9GZM6 311 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.17□□□□□ -0.78
CHMP3-205ENST00000409810 EPN3Q9H201 632 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 ACBD3Q9H3P7 528 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 CDCP1Q9H5V8 836 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 LRTM1Q9HBL6 345 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 ZBTB20Q9HC78 741 aaPredicted RBP10.17□□□□□ -0.78
CHMP3-205ENST00000409810 C1orf109Q9NX04 203 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 STMN3Q9NZ72 180 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 TMED5Q9Y3A6 229 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 DNAJC15Q9Y5T4 150 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 ZNF780BQ9Y6R6 833 aa10.17□□□□□ -0.78
CHMP3-205ENST00000409810 ZNF462Q96JM2 2506 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 RP1L1Q8IWN7 2480 aaPredicted RBP10.16□□□□□ -0.78
CHMP3-205ENST00000409810 MYOCOSA0A1B0GUC4 107 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 GABRR3A8MPY1 467 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 SEC22BO75396 215 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 WDPCPO95876 746 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 IL3P08700 152 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 ANXA4P09525 319 aaPredicted RBP10.16□□□□□ -0.78
CHMP3-205ENST00000409810 CPMP14384 443 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 PORP16435 677 aaPredicted RBP10.16□□□□□ -0.78
CHMP3-205ENST00000409810 BGNP21810 368 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 SLC1A6P48664 564 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 CD97P48960 835 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 XKP51811 444 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 ABCE1P61221 599 aaKnown RBP10.16□□□□□ -0.78
CHMP3-205ENST00000409810 RAE1P78406 368 aaKnown RBP10.16□□□□□ -0.78
CHMP3-205ENST00000409810 STX3Q13277 289 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 IKBIPQ70UQ0 350 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 GALNT12Q8IXK2 581 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 OR5L2Q8NGL0 311 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 OR6Y1Q8NGX8 325 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 OR8K3Q8NH51 312 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 CDC26Q8NHZ8 85 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 RAB3IL1Q8TBN0 382 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 MGARPQ8TDB4 240 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 C16orf78Q8WTQ4 265 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 RIT1Q92963 219 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 KLHL29Q96CT2 875 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 C11orf24Q96F05 449 aaPredicted RBP10.16□□□□□ -0.78
CHMP3-205ENST00000409810 FBXL20Q96IG2 436 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 PPP3R2Q96LZ3 170 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 UTP23Q9BRU9 249 aaKnown RBP10.16□□□□□ -0.78
CHMP3-205ENST00000409810 CNPPD1Q9BV87 410 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 MIEF1Q9NQG6 463 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 RYDENQ9NUL5 291 aaKnown RBP10.16□□□□□ -0.78
CHMP3-205ENST00000409810 PLA2G3Q9NZ20 509 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 EHD3Q9NZN3 535 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 ZDHHC2Q9UIJ5 367 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 UTS2RQ9UKP6 389 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 ENTPD4Q9Y227 616 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 DLGAP4Q9Y2H0 992 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.16□□□□□ -0.78
CHMP3-205ENST00000409810 RAP2CQ9Y3L5 183 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 POLR3HQ9Y535 204 aaPredicted RBP10.16□□□□□ -0.78
CHMP3-205ENST00000409810 SVILO95425 2214 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 CFAP46Q8IYW2 2715 aa10.16□□□□□ -0.78
CHMP3-205ENST00000409810 NBASA2RRP1 2371 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 OR6C76A6NM76 312 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 HMGB1P1B2RPK0 211 aaPredicted RBP10.15□□□□□ -0.78
CHMP3-205ENST00000409810 TMEM233B4DJY2 109 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 PIP5K1BO14986 540 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 PGRMC2O15173 223 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 SKAP2O75563 359 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms