RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 SLC13A2Q13183 592 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 DNASE1L3Q13609 305 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 C9orf50Q5SZB4 431 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 USP30Q70CQ3 517 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 SPRED1Q7Z699 444 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 TMEM179BQ7Z7N9 219 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 FAM217AQ8IXS0 508 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 FAR1Q8WVX9 515 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 QRSL1Q9H0R6 528 aaKnown RBP12.85□□□□□ -0.35
SIRPA-203ENST00000400068 ABCG4Q9H172 646 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 SPNS1Q9H2V7 528 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 EHD1Q9H4M9 534 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 TMEM5Q9Y2B1 443 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 URADA6NGE7 173 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 A8MUA0 341 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 TLR4O00206 839 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 PPM1DO15297 605 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 RPL4P36578 427 aaKnown RBP12.85□□□□□ -0.35
SIRPA-203ENST00000400068 ZNF846Q147U1 533 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 SLC35F1Q5T1Q4 408 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 SPARTQ8N0X7 666 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 PSD4Q8NDX1 1056 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 GRHL3Q8TE85 626 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 TESCQ96BS2 214 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 Q96MT0 163 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 TTTY10Q9BZA0 68 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 TBC1D17Q9HA65 648 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 SH2B3Q9UQQ2 575 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 SIP14410 1827 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 OR6C74A6NCV1 312 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 GPR37L1O60883 481 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 B4GALT2O60909 372 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 ZNF821O75541 412 aaPredicted RBP12.84□□□□□ -0.35
SIRPA-203ENST00000400068 CD22P20273 847 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 NDUFA5Q16718 116 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 RIPOR3Q96MK2 946 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 CAMK1GQ96NX5 476 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 LYSMD1Q96S90 227 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 UHRF1Q96T88 793 aaPredicted RBP12.84□□□□□ -0.35
SIRPA-203ENST00000400068 TEX10Q9NXF1 929 aaPredicted RBP12.84□□□□□ -0.35
SIRPA-203ENST00000400068 POFUT2Q9Y2G5 429 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 GFYI3L273 518 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 PCDH17O14917 1159 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 NR2F6P10588 404 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 PVRP15151 417 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 UQCRC2P22695 453 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 EPHA2P29317 976 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 NFATC3Q12968 1075 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 UBXN2BQ14CS0 331 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 CPZQ66K79 652 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 COX18Q8N8Q8 333 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 KBTBD8Q8NFY9 601 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 OR2L2Q8NH16 312 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 INSM2Q96T92 566 aaPredicted RBP12.84□□□□□ -0.35
SIRPA-203ENST00000400068 YTHDF1Q9BYJ9 559 aaKnown RBP12.84□□□□□ -0.35
SIRPA-203ENST00000400068 TMPRSS11EQ9UL52 423 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 ACSL5Q9ULC5 683 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 CYP8B1Q9UNU6 501 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 KRBA1A5PL33 1030 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 PSIP1O75475 530 aaKnown RBP12.84□□□□□ -0.35
SIRPA-203ENST00000400068 OLFM2O95897 454 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 CDK4P11802 303 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 TCEA1P23193 301 aaKnown RBP12.84□□□□□ -0.35
SIRPA-203ENST00000400068 RAB28P51157 221 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 AMZ1Q400G9 498 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 ZNF438Q7Z4V0 828 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 PDZD3Q86UT5 571 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 OR52N2Q8NGI0 321 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 RPL3LQ92901 407 aaKnown RBP12.84□□□□□ -0.35
SIRPA-203ENST00000400068 PRR14Q9BWN1 585 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 PRRG3Q9BZD7 231 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 IL21RQ9HBE5 538 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 STARD5Q9NSY2 213 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 STOML2Q9UJZ1 356 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 CDH7Q9ULB5 785 aa12.84□□□□□ -0.35
SIRPA-203ENST00000400068 IL33O95760 270 aa12.83□□□□□ -0.35
SIRPA-203ENST00000400068 ALPPP05187 535 aa12.83□□□□□ -0.35
SIRPA-203ENST00000400068 KHKP50053 298 aa12.83□□□□□ -0.35
SIRPA-203ENST00000400068 DAPP51397 102 aa12.83□□□□□ -0.35
SIRPA-203ENST00000400068 GNA13Q14344 377 aa12.83□□□□□ -0.35
SIRPA-203ENST00000400068 COL19A1Q14993 1142 aa12.83□□□□□ -0.35
SIRPA-203ENST00000400068 ZNF385BQ569K4 471 aa12.83□□□□□ -0.35
SIRPA-203ENST00000400068 UBTD2Q8WUN7 234 aa12.83□□□□□ -0.35
SIRPA-203ENST00000400068 RLN3Q8WXF3 142 aa12.83□□□□□ -0.35
SIRPA-203ENST00000400068 ECHDC3Q96DC8 303 aa12.83□□□□□ -0.35
SIRPA-203ENST00000400068 OR2M4Q96R27 311 aa12.83□□□□□ -0.35
SIRPA-203ENST00000400068 UCK2Q9BZX2 261 aa12.83□□□□□ -0.35
SIRPA-203ENST00000400068 AMBRA1Q9C0C7 1298 aa12.83□□□□□ -0.35
SIRPA-203ENST00000400068 BHLHE41Q9C0J9 482 aaPredicted RBP12.83□□□□□ -0.35
SIRPA-203ENST00000400068 PTGFRNQ9P2B2 879 aa12.83□□□□□ -0.35
SIRPA-203ENST00000400068 TCRBV5S2A0A599 114 aa12.83□□□□□ -0.36
SIRPA-203ENST00000400068 H0Y8X5 98 aa12.83□□□□□ -0.36
SIRPA-203ENST00000400068 B3GALT2O43825 422 aa12.83□□□□□ -0.36
SIRPA-203ENST00000400068 CRHBPP24387 322 aa12.83□□□□□ -0.36
SIRPA-203ENST00000400068 SYPL1Q16563 259 aa12.83□□□□□ -0.36
SIRPA-203ENST00000400068 TIMM50Q3ZCQ8 353 aa12.83□□□□□ -0.36
SIRPA-203ENST00000400068 CDKL4Q5MAI5 379 aa12.83□□□□□ -0.36
SIRPA-203ENST00000400068 PDZK1Q5T2W1 519 aa12.83□□□□□ -0.36
SIRPA-203ENST00000400068 SHFQ7M4L6 423 aa12.83□□□□□ -0.36
SIRPA-203ENST00000400068 C10orf111Q8N326 155 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms