RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 C2orf54Q08AI8 447 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 PDIA2Q13087 525 aaKnown RBP11.08□□□□□ -0.64
TFF3-202ENST00000398431 CHIT1Q13231 466 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 TBCCQ15814 346 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 HSP90B2PQ58FF3 399 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 KLHL7Q8IXQ5 586 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 LAS2Q8IYD9 372 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 LRRC25Q8N386 305 aaPredicted RBP11.08□□□□□ -0.64
TFF3-202ENST00000398431 RELL2Q8NC24 303 aaPredicted RBP11.08□□□□□ -0.64
TFF3-202ENST00000398431 NAXEQ8NCW5 288 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 SRFBP1Q8NEF9 429 aaKnown RBP11.08□□□□□ -0.64
TFF3-202ENST00000398431 UBXN10Q96LJ8 280 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 GPATCH1Q9BRR8 931 aaKnown RBP11.08□□□□□ -0.64
TFF3-202ENST00000398431 EFCAB11Q9BUY7 163 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 SORBS1Q9BX66 1292 aaKnown RBP11.08□□□□□ -0.64
TFF3-202ENST00000398431 POLDIP3Q9BY77 421 aaKnown RBP11.08□□□□□ -0.64
TFF3-202ENST00000398431 GSX1Q9H4S2 264 aaPredicted RBP11.08□□□□□ -0.64
TFF3-202ENST00000398431 ZNF703Q9H7S9 590 aaPredicted RBP11.08□□□□□ -0.64
TFF3-202ENST00000398431 ZFP64Q9NPA5 681 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 ACKR4Q9NPB9 350 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 DLL4Q9NR61 685 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 WWOXQ9NZC7 414 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 CRIM1Q9NZV1 1036 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 PCDHGB3Q9Y5G1 929 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 SEC31AO94979 1220 aaKnown RBP11.07□□□□□ -0.64
TFF3-202ENST00000398431 C1QAP02745 245 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 GABRA1P14867 456 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 CPN2P22792 545 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 CEACAM8P31997 349 aaPredicted RBP11.07□□□□□ -0.64
TFF3-202ENST00000398431 KIR2DL3P43628 341 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 IRF8Q02556 426 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 PCDH1Q08174 1060 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 SLAMF1Q13291 335 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 LAPTM5Q13571 262 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 CEBPEQ15744 281 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 PDK4Q16654 411 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 AP5B1Q2VPB7 878 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 TMEM35AQ53FP2 167 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 DEPDC1Q5TB30 811 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 PRAMEF20Q5VT98 475 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 C18orf63Q68DL7 685 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 WDR93Q6P2C0 686 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 SYDE1Q6ZW31 735 aaPredicted RBP11.07□□□□□ -0.64
TFF3-202ENST00000398431 WDR53Q7Z5U6 358 aaPredicted RBP11.07□□□□□ -0.64
TFF3-202ENST00000398431 ULK2Q8IYT8 1036 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 RNF175Q8N4F7 328 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 SLC15A4Q8N697 577 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 SNX31Q8N9S9 440 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 PDPRQ8NCN5 879 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 BBOF1Q8ND07 529 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 NEIL3Q8TAT5 605 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 SPACA9Q96E40 222 aaPredicted RBP11.07□□□□□ -0.64
TFF3-202ENST00000398431 RUNDC3BQ96NL0 473 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 SH3GL2Q99962 352 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 CD244Q9BZW8 370 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 ROGDIQ9GZN7 287 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 SLC6A15Q9H2J7 730 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 OR51B5Q9H339 312 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 EXO5Q9H790 373 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 CNOT10Q9H9A5 744 aaKnown RBP11.07□□□□□ -0.64
TFF3-202ENST00000398431 CNOT11Q9UKZ1 510 aaKnown RBP11.07□□□□□ -0.64
TFF3-202ENST00000398431 RPH3AQ9Y2J0 694 aaPredicted RBP11.07□□□□□ -0.64
TFF3-202ENST00000398431 CHCHD2Q9Y6H1 151 aaPredicted RBP11.07□□□□□ -0.64
TFF3-202ENST00000398431 KIAA1549Q9HCM3 1950 aa11.07□□□□□ -0.64
TFF3-202ENST00000398431 SAP18O00422 153 aaKnown RBP11.06□□□□□ -0.64
TFF3-202ENST00000398431 CCNT2O60583 730 aaKnown RBP11.06□□□□□ -0.64
TFF3-202ENST00000398431 PRKRAO75569 313 aaKnown RBP11.06□□□□□ -0.64
TFF3-202ENST00000398431 CLPSP04118 112 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 FBXO45P0C2W1 286 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 SSTR1P30872 391 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 HNRNPH2P55795 449 aaKnown RBP11.06□□□□□ -0.64
TFF3-202ENST00000398431 WNT3P56703 355 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 ATP6V0D1P61421 351 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 DR1Q01658 176 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 FOXD4Q12950 439 aaPredicted RBP11.06□□□□□ -0.64
TFF3-202ENST00000398431 DLG1Q12959 904 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 HIST2H2ACQ16777 129 aaPredicted RBP11.06□□□□□ -0.64
TFF3-202ENST00000398431 HIST2H2AA3Q6FI13 130 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 OR4C11Q6IEV9 310 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 ISCA2Q86U28 154 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 CDC20BQ86Y33 519 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 FBXW8Q8N3Y1 598 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 NOA1Q8NC60 698 aaKnown RBP11.06□□□□□ -0.64
TFF3-202ENST00000398431 TNIP2Q8NFZ5 429 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 OR7G3Q8NG95 312 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 OR10G3Q8NGC4 313 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 UCN3Q969E3 161 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 RBM18Q96H35 190 aaKnown RBP11.06□□□□□ -0.64
TFF3-202ENST00000398431 FBXL20Q96IG2 436 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 DGAT2Q96PD7 388 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 KRT12Q99456 494 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 GPR22Q99680 433 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 CLEC4MQ9H2X3 399 aaPredicted RBP11.06□□□□□ -0.64
TFF3-202ENST00000398431 RPF2Q9H7B2 306 aaKnown RBP11.06□□□□□ -0.64
TFF3-202ENST00000398431 QPCTLQ9NXS2 382 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 NSMCE4AQ9NXX6 385 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 CD274Q9NZQ7 290 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 B4GALT7Q9UBV7 327 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 COPS7AQ9UBW8 275 aa11.06□□□□□ -0.64
TFF3-202ENST00000398431 PLEKHA6Q9Y2H5 1048 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms