RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 KCNK12Q9HB15 430 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 ENY2Q9NPA8 101 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 OR7A10O76100 309 aa13.02□□□□□ -0.32
GPC6-201ENST00000377047 C8BP07358 591 aa13.02□□□□□ -0.32
GPC6-201ENST00000377047 S1PR1P21453 382 aa13.02□□□□□ -0.32
GPC6-201ENST00000377047 FOLR3P41439 243 aa13.02□□□□□ -0.32
GPC6-201ENST00000377047 GLP1RP43220 463 aa13.02□□□□□ -0.32
GPC6-201ENST00000377047 SOX9P48436 509 aa13.02□□□□□ -0.32
GPC6-201ENST00000377047 MEP1AQ16819 746 aa13.02□□□□□ -0.32
GPC6-201ENST00000377047 ABHD17BQ5VST6 288 aa13.02□□□□□ -0.32
GPC6-201ENST00000377047 ATG9BQ674R7 924 aa13.02□□□□□ -0.32
GPC6-201ENST00000377047 ERMP1Q7Z2K6 904 aa13.02□□□□□ -0.32
GPC6-201ENST00000377047 ZSWIM9Q86XI8 627 aa13.02□□□□□ -0.32
GPC6-201ENST00000377047 ZNF778Q96MU6 729 aa13.02□□□□□ -0.32
GPC6-201ENST00000377047 KLF16Q9BXK1 252 aaPredicted RBP13.02□□□□□ -0.32
GPC6-201ENST00000377047 TOR3AQ9H497 397 aa13.02□□□□□ -0.32
GPC6-201ENST00000377047 ZNF69Q9UC07 566 aa13.02□□□□□ -0.32
GPC6-201ENST00000377047 A0A0U1RQS6 177 aa13.02□□□□□ -0.32
GPC6-201ENST00000377047 SCAMP2O15127 329 aaKnown RBP13.02□□□□□ -0.32
GPC6-201ENST00000377047 SMAD9O15198 467 aaKnown RBP13.02□□□□□ -0.32
GPC6-201ENST00000377047 SLC22A1O15245 554 aa13.02□□□□□ -0.32
GPC6-201ENST00000377047 BCAS2O75934 225 aaPredicted RBP13.02□□□□□ -0.32
GPC6-201ENST00000377047 CRYZQ08257 329 aaKnown RBP13.02□□□□□ -0.32
GPC6-201ENST00000377047 PM20D1Q6GTS8 502 aa13.02□□□□□ -0.32
GPC6-201ENST00000377047 HEBP1Q9NRV9 189 aa13.02□□□□□ -0.32
GPC6-201ENST00000377047 ITGB7P26010 798 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 SOX2P48431 317 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 SPATS1Q496A3 300 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 PAQR7Q86WK9 346 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 PLCZ1Q86YW0 608 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 GID4Q8IVV7 300 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 GPR137CQ8N3F9 429 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 OR8J3Q8NGG0 315 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 GJD2Q9UKL4 321 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 SMIM30A4D0T7 59 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 SH3D21A4FU49 640 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 PLOD2O00469 737 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 PPM1BO75688 479 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 HERV-K104P61576 105 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 FADDQ13158 208 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 CES4AQ5XG92 561 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 THAP4Q8WY91 577 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 CCDC115Q96NT0 180 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 FIZ1Q96SL8 496 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 IRF2BPLQ9H1B7 796 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 PDLIM7Q9NR12 457 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 ACSL6Q9UKU0 697 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 SH3PXD2BA1X283 911 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 CDH15P55291 814 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 TAS2R38P59533 333 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 GAS6Q14393 721 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 NKAPLQ5M9Q1 402 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 CCDC120Q96HB5 630 aa13.02□□□□□ -0.33
GPC6-201ENST00000377047 TTYH1Q9H313 450 aaPredicted RBP13.02□□□□□ -0.33
GPC6-201ENST00000377047 EXOSC1Q9Y3B2 195 aaKnown RBP13.02□□□□□ -0.33
GPC6-201ENST00000377047 A6NLC8 198 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 GALK2Q01415 458 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 BTBD16Q32M84 506 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 BEND4Q6ZU67 534 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 LARP4Q71RC2 724 aaKnown RBP eCLIP13.01□□□□□ -0.33
GPC6-201ENST00000377047 SSX6Q7RTT6 188 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 ACVR1CQ8NER5 493 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 DOHHQ9BU89 302 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 C1orf21Q9H246 121 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 SRA1Q9HD15 236 aaKnown RBP13.01□□□□□ -0.33
GPC6-201ENST00000377047 ANKMY1Q9P2S6 941 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 SLC7A11Q9UPY5 501 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 S100A9P06702 114 aaKnown RBP13.01□□□□□ -0.33
GPC6-201ENST00000377047 NAA10P41227 235 aaPredicted RBP13.01□□□□□ -0.33
GPC6-201ENST00000377047 SLC6A11P48066 632 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 EXOC3L2Q2M3D2 409 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 OR2T33Q8NG76 320 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 OR8H1Q8NGG4 311 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 MNTQ99583 582 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 PIP5K1AQ99755 562 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 DPH2Q9BQC3 489 aaPredicted RBP13.01□□□□□ -0.33
GPC6-201ENST00000377047 SLC46A2Q9BY10 475 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 DCSTAMPQ9H295 470 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 HHATLQ9HCP6 504 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 HCSTQ9UBK5 93 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 FAAHO00519 579 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 SMAD6O43541 496 aaKnown RBP13.01□□□□□ -0.33
GPC6-201ENST00000377047 MECP2P51608 486 aaKnown RBP13.01□□□□□ -0.33
GPC6-201ENST00000377047 RHDQ02161 417 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 RPA4Q13156 261 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 ALDH16A1Q8IZ83 802 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 OR52B6Q8NGF0 335 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 CREB3L4Q8TEY5 395 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 RLN3Q8WXF3 142 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 MCOLN1Q9GZU1 580 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 EIF3KQ9UBQ5 218 aaKnown RBP13.01□□□□□ -0.33
GPC6-201ENST00000377047 PCDHGA6Q9Y5G7 932 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 OR52A4PA6NMU1 304 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 SDHDO14521 159 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 SEMA3DO95025 777 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 PRKCAP17252 672 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 S100A10P60903 97 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 KIAA0895LQ68EN5 471 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 TMEM135Q86UB9 458 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 FBXL20Q96IG2 436 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms