RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 ADPRMQ3LIE5 342 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 UBE3DQ7Z6J8 389 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 P2RY8Q86VZ1 359 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 ARMC8Q8IUR7 673 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 SIMC1Q8NDZ2 872 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 SETD7Q8WTS6 366 aaKnown RBP11.15□□□□□ -0.62
PDE6C-201ENST00000371447 ZG16BQ96DA0 208 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 SIPA1Q96FS4 1042 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 HDAC8Q9BY41 377 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 C6orf106Q9H6K1 298 aaPredicted RBP11.15□□□□□ -0.62
PDE6C-201ENST00000371447 PLGRKTQ9HBL7 147 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 KCNE3Q9Y6H6 103 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 TMEM247A6NEH6 219 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 NPIPB8E9PQR5 432 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 H3BQ06 376 aaPredicted RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 CACNB4O00305 520 aaPredicted RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 CCNB2O95067 398 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 EGFP01133 1207 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 ACADMP11310 421 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 ZNF24P17028 368 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 CXCR2P25025 360 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 RAB28P51157 221 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 TARDBPQ13148 414 aaKnown RBP eCLIP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 IQCCQ4KMZ1 466 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 TPRG1LQ5T0D9 272 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 ZNF776Q68DI1 518 aaPredicted RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 OR4C11Q6IEV9 310 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 ADAMTSL4Q6UY14 1074 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 PTCHD4Q6ZW05 846 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 HCAR2Q8TDS4 363 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 ADAMTS16Q8TE57 1224 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 HMGB4Q8WW32 186 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 CHCHD6Q9BRQ6 235 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 ZNF717Q9BY31 904 aaPredicted RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 C6orf62Q9GZU0 229 aaPredicted RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 TMEM168Q9H0V1 697 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 STARD5Q9NSY2 213 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 TBC1D23Q9NUY8 699 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 SPATA7Q9P0W8 599 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 NDRG4Q9ULP0 352 aaKnown RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 LRRK1Q38SD2 2015 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 LTBP2Q14767 1821 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 SMIM30A4D0T7 59 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 TRIM64CA6NLI5 447 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 LAMP2P13473 410 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 POLR2CP19387 275 aaPredicted RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 UQCRC2P22695 453 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 CNR2P34972 360 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 MAPK9P45984 424 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 SLC35A2P78381 396 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 DUSP2Q05923 314 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 PRDX1Q06830 199 aaKnown RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 C1orf61Q13536 156 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 CARTPTQ16568 116 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 DEFB134Q4QY38 66 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 GTF2IRD2BQ6EKJ0 949 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 ZNF765Q7L2R6 523 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 GTF2IRD2Q86UP8 949 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 ABHD11Q8NFV4 315 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 GLIPR2Q9H4G4 154 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 NMNAT1Q9HAN9 279 aaPredicted RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 ZBTB20Q9HC78 741 aaPredicted RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 ACER3Q9NUN7 267 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 TMCC3Q9ULS5 477 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 SNRNP200O75643 2136 aaKnown RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 CXorf51AA0A1B0GTR3 108 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 K7EQS6 105 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 DNAJB6O75190 326 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 ASGR2P07307 311 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 RYKP34925 604 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 RPS21P63220 83 aaKnown RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 SIM1P81133 766 aaPredicted RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 ALDH6A1Q02252 535 aaKnown RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 ST3GAL4Q11206 333 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 TOP3AQ13472 1001 aaPredicted RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 SLC9A5Q14940 896 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 PTGES3Q15185 160 aaKnown RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 SLC16A12Q6ZSM3 486 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 TSPYL5Q86VY4 417 aaPredicted RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 SDR16C5Q8N3Y7 309 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 OR52E4Q8NGH9 312 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 ZNF420Q8TAQ5 688 aaPredicted RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 APH1BQ8WW43 257 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 GEMIN6Q8WXD5 167 aaKnown RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 MUL1Q969V5 352 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 ZBED6CLQ96FA7 236 aaPredicted RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 PLEKHA8Q96JA3 519 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 LINC00615Q96LM1 132 aaPredicted RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 PIP5K1AQ99755 562 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 TREX2Q9BQ50 279 aaPredicted RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 RSPO3Q9BXY4 272 aaPredicted RBP11.14□□□□□ -0.63
PDE6C-201ENST00000371447 ACOT13Q9NPJ3 140 aa11.14□□□□□ -0.63
PDE6C-201ENST00000371447 TRIM64A6NGJ6 449 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 IFNA14P01570 189 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 IL1RNP18510 177 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 C5AR1P21730 350 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 PCMT1P22061 227 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 LIPAP38571 399 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 AVPR1BP47901 424 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 SRSF5Q13243 272 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms