RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 RYDENQ9NUL5 291 aaKnown RBP14.78□□□□□ -0.04
CKS1B-202ENST00000368436 PHF11Q9UIL8 331 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.78□□□□□ -0.04
CKS1B-202ENST00000368436 ATP6AP2A0A1C7CYW4 349 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 HRKO00198 91 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 HCN1O60741 890 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 WDR1O75083 606 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 ATP6AP2O75787 350 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 ALOX15P16050 662 aaPredicted RBP14.77□□□□□ -0.05
CKS1B-202ENST00000368436 PIGAP37287 484 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 MAN2A2P49641 1150 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 HNRNPH2P55795 449 aaKnown RBP14.77□□□□□ -0.05
CKS1B-202ENST00000368436 CAV1Q03135 178 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 TBL3Q12788 808 aaKnown RBP14.77□□□□□ -0.05
CKS1B-202ENST00000368436 NAB1Q13506 487 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 SLMAPQ14BN4 828 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 LIPJQ5W064 366 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 C18orf63Q68DL7 685 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 TEX9Q8N6V9 391 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 RHEBL1Q8TAI7 183 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 PAQR8Q8TEZ7 354 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 SARAFQ96BY9 339 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 NXNL1Q96CM4 212 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 SPACA9Q96E40 222 aaPredicted RBP14.77□□□□□ -0.05
CKS1B-202ENST00000368436 ZNF717Q9BY31 904 aaPredicted RBP14.77□□□□□ -0.05
CKS1B-202ENST00000368436 DMRT3Q9NQL9 472 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.77□□□□□ -0.05
CKS1B-202ENST00000368436 PYCARDQ9ULZ3 195 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 NINQ8N4C6 2090 aa14.77□□□□□ -0.05
CKS1B-202ENST00000368436 TRGV5A0A0B4J1U4 118 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 A0A0G2JNJ9 132 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 CCDC189A1A4V9 331 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 PROM1O43490 865 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 DYRK3O43781 588 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 GPR75O95800 540 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 FREM3P0C091 2139 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 ENDOUP21128 410 aaKnown RBP14.76□□□□□ -0.05
CKS1B-202ENST00000368436 PTX3P26022 381 aaPredicted RBP14.76□□□□□ -0.05
CKS1B-202ENST00000368436 TLX1P31314 330 aaPredicted RBP14.76□□□□□ -0.05
CKS1B-202ENST00000368436 STX2P32856 288 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 MAGEA4P43358 317 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 ZFP36L2P47974 494 aaKnown RBP14.76□□□□□ -0.05
CKS1B-202ENST00000368436 RAP1GDS1P52306 607 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 PLTPP55058 493 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 PLIN5Q00G26 463 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 GUCY2DQ02846 1103 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 DDX39BQ13838 428 aaKnown RBP14.76□□□□□ -0.05
CKS1B-202ENST00000368436 SETDB1Q15047 1291 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 SPRED3Q2MJR0 410 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 WLSQ5T9L3 541 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 MRM1Q6IN84 353 aaKnown RBP14.76□□□□□ -0.05
CKS1B-202ENST00000368436 CCDC91Q7Z6B0 441 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 LIX1LQ8IVB5 337 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 DND1Q8IYX4 353 aaKnown RBP14.76□□□□□ -0.05
CKS1B-202ENST00000368436 ST13P4Q8IZP2 240 aaPredicted RBP14.76□□□□□ -0.05
CKS1B-202ENST00000368436 CENPLQ8N0S6 344 aaPredicted RBP14.76□□□□□ -0.05
CKS1B-202ENST00000368436 CLYBLQ8N0X4 340 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 FBXW8Q8N3Y1 598 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 OR10Q1Q8NGQ4 319 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 FBXO25Q8TCJ0 367 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 FBF1Q8TES7 1133 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 ZNF559Q9BR84 538 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 PELOQ9BRX2 385 aaKnown RBP14.76□□□□□ -0.05
CKS1B-202ENST00000368436 CENPKQ9BS16 269 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 LDAHQ9H6V9 325 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 ZNF703Q9H7S9 590 aaPredicted RBP14.76□□□□□ -0.05
CKS1B-202ENST00000368436 PROK2Q9HC23 129 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 SLC24A3Q9HC58 644 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 PRM3Q9NNZ6 103 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 ZFP64Q9NPA5 681 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 PSD3Q9NYI0 1048 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 CNIH4Q9P003 139 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 Q9UFV3 132 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 ACAD8Q9UKU7 415 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 ACOT9Q9Y305 439 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 ASB4Q9Y574 426 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 PCDHGB3Q9Y5G1 929 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 PCDHGA11Q9Y5H2 935 aa14.76□□□□□ -0.05
CKS1B-202ENST00000368436 C2CD3Q4AC94 2353 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 SYCE1LA8MT33 242 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 H0YIV9 168 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 UGDHO60701 494 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 PRKRAO75569 313 aaKnown RBP14.75□□□□□ -0.05
CKS1B-202ENST00000368436 FBXO45P0C2W1 286 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 RFPL3SP0C7P2 107 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 GALNSP34059 522 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 BSGP35613 385 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 ADH7P40394 386 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 RPS13P62277 151 aaKnown RBP14.75□□□□□ -0.05
CKS1B-202ENST00000368436 HERVK_113P63132 956 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 ERVK-8P63133 956 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 C2orf54Q08AI8 447 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 CUL3Q13618 768 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 C1orf185Q5T7R7 199 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 CES4AQ5XG92 561 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 ZDHHC24Q6UX98 284 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 LRRC25Q8N386 305 aaPredicted RBP14.75□□□□□ -0.05
CKS1B-202ENST00000368436 KCTD4Q8WVF5 259 aa14.75□□□□□ -0.05
CKS1B-202ENST00000368436 MTERF1Q99551 399 aaKnown RBP14.75□□□□□ -0.05
CKS1B-202ENST00000368436 CNPPD1Q9BV87 410 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms