RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 C12orf40Q86WS4 652 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 FAM46DQ8NEK8 389 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 ZDHHC1Q8WTX9 485 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 EMID1Q96A84 441 aaPredicted RBP12.51□□□□□ -0.41
NCSTN-202ENST00000368063 DUSP16Q9BY84 665 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 TKTL2Q9H0I9 626 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 ABCG4Q9H172 646 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 SLC25A51Q9H1U9 297 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 CXCL16Q9H2A7 254 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 LRTM1Q9HBL6 345 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 OSER1Q9NX31 292 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 PPT2Q9UMR5 302 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 SPIN1Q9Y657 262 aaPredicted RBP12.51□□□□□ -0.41
NCSTN-202ENST00000368063 COL4A5P29400 1685 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 COL11A1P12107 1806 aaPredicted RBP12.51□□□□□ -0.41
NCSTN-202ENST00000368063 A0A0U1RQF3 1178 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 GABRR3A8MPY1 467 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 CLIC1O00299 241 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 PRRG1O14668 218 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 TXNP10599 105 aaKnown RBP12.51□□□□□ -0.41
NCSTN-202ENST00000368063 GPX2P18283 190 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 ELK1P19419 428 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 RAB3BP20337 219 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 RPS12P25398 132 aaKnown RBP12.51□□□□□ -0.41
NCSTN-202ENST00000368063 PIK3CGP48736 1102 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 AFF1P51825 1210 aaKnown RBP12.51□□□□□ -0.41
NCSTN-202ENST00000368063 MAZP56270 477 aaKnown RBP12.51□□□□□ -0.41
NCSTN-202ENST00000368063 ERVK-25P63136 954 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 FABP5Q01469 135 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 SPIBQ01892 262 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 DSC2Q02487 901 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 SGCAQ16586 387 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 CRTC2Q53ET0 693 aaPredicted RBP12.51□□□□□ -0.41
NCSTN-202ENST00000368063 B3GNTL1Q67FW5 361 aaPredicted RBP12.51□□□□□ -0.41
NCSTN-202ENST00000368063 RAET1GQ6H3X3 334 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 AFTPHQ6ULP2 937 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 SYNPOQ8N3V7 929 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 NKAPQ8N5F7 415 aaKnown RBP12.51□□□□□ -0.41
NCSTN-202ENST00000368063 CAMKVQ8NCB2 501 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 BEST4Q8NFU0 473 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 ADAMTS14Q8WXS8 1223 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 GTPBP3Q969Y2 492 aaKnown RBP12.51□□□□□ -0.41
NCSTN-202ENST00000368063 C1GALT1C1Q96EU7 318 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 FCRL1Q96LA6 429 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 UBL7Q96S82 380 aaPredicted RBP12.51□□□□□ -0.41
NCSTN-202ENST00000368063 GKN1Q9NS71 199 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 EXTL2Q9UBQ6 330 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 ZMYM5Q9UJ78 669 aa12.51□□□□□ -0.41
NCSTN-202ENST00000368063 SUV39H1O43463 412 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 SLC19A2O60779 497 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 RASGRP1O95267 797 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 ALDOBP05062 364 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 AHCYP23526 432 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 FGF9P31371 208 aaPredicted RBP12.5□□□□□ -0.41
NCSTN-202ENST00000368063 CCR1P32246 355 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 RFC3P40938 356 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 GTF2H2Q13888 395 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 VEZF1Q14119 521 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 PCBP2Q15366 365 aaKnown RBP eCLIP12.5□□□□□ -0.415e-25■■■■■ 208.7
NCSTN-202ENST00000368063 GTF2H2CQ6P1K8 395 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 ZNF687Q8N1G0 1237 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 CHCHD4Q8N4Q1 142 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 IMP4Q96G21 291 aaKnown RBP12.5□□□□□ -0.41
NCSTN-202ENST00000368063 RBM14Q96PK6 669 aaKnown RBP12.5□□□□□ -0.41
NCSTN-202ENST00000368063 HACL1Q9UJ83 578 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 CHST2Q9Y4C5 530 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 EP400Q96L91 3159 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 TRBV23-1A0A0A0MS06 115 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 TMEM82A0PJX8 343 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 ANKDD1BA6NHY2 528 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 YJEFN3A6XGL0 299 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 L7N2F9 121 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 SOD1P00441 154 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 CRISP1P54107 249 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 RPS14P62263 151 aaKnown RBP12.5□□□□□ -0.41
NCSTN-202ENST00000368063 CRHR2Q13324 411 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 SIRPB2Q5JXA9 342 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 ATAT1Q5SQI0 421 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 HECTD3Q5T447 861 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 WDR53Q7Z5U6 358 aaPredicted RBP12.5□□□□□ -0.41
NCSTN-202ENST00000368063 DMBX1Q8NFW5 382 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 EDARADDQ8WWZ3 215 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 UPF1Q92900 1129 aaKnown RBP eCLIP12.5□□□□□ -0.411e-10■■■□□ 17.4
NCSTN-202ENST00000368063 DOHHQ9BU89 302 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 SEC14L3Q9UDX4 400 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 BTNL2Q9UIR0 455 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 DLGAP4Q9Y2H0 992 aa12.5□□□□□ -0.41
NCSTN-202ENST00000368063 SHISA3A0PJX4 238 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 SSNA1O43805 119 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 PAGE1O75459 146 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 OTCP00480 354 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 UGT2B7P16662 529 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 TNFRSF1BP20333 461 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 TNFAIP1Q13829 316 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 ZRANB3Q5FWF4 1079 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 ALG1LQ6GMV1 187 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 SLC25A25Q6KCM7 469 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 MZT2AQ6P582 158 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 CD200R1LQ6Q8B3 271 aa12.49□□□□□ -0.41
NCSTN-202ENST00000368063 RNF165Q6ZSG1 346 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms