RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 SYT4Q9H2B2 425 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 TREM1Q9NP99 234 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 EMC3Q9P0I2 261 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 COL20A1Q9P218 1284 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 ACAD8Q9UKU7 415 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 MGAT4BQ9UQ53 548 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 LOC102723532A0A0G2JNH3 316 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 C2orf71A6NGG8 1288 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 DNAJB5O75953 348 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 CST3P01034 146 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-202ENST00000356435 FPR1P21462 350 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 C5AR1P21730 350 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 S100PP25815 95 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 MAN2A2P49641 1150 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 ACY1Q03154 408 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 RBM39Q14498 530 aaKnown RBP5.31□□□□□ -1.56
PTPRD-202ENST00000356435 ATAD3CQ5T2N8 411 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 LYSMD4Q5XG99 296 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 OLFML1Q6UWY5 402 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 SERINC5Q86VE9 423 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 ZSWIM9Q86XI8 627 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 TICAM1Q8IUC6 712 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 RHBDD1Q8TEB9 315 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF296Q8WUU4 475 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-202ENST00000356435 HS6ST2Q96MM7 605 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 FZD3Q9NPG1 666 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 CICQ96RK0 1608 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-202ENST00000356435 FAAHO00519 579 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 PEX10O60683 326 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 SEMA4FO95754 770 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF28P17035 718 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 AMY2BP19961 511 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 GABRA3P34903 492 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 SLC26A5P58743 744 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 MEDAGQ5VYS4 303 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 TMED4Q7Z7H5 227 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 ZBTB46Q86UZ6 589 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 TMIEQ8NEW7 156 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 COPZ2Q9P299 210 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 KLHL13Q9P2N7 655 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 CACNG4Q9UBN1 327 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 MCTS1Q9ULC4 181 aaKnown RBP5.31□□□□□ -1.56
PTPRD-202ENST00000356435 IGLV3-22A0A075B6J6 115 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 ATE1O95260 518 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 ACRV1P26436 265 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 GRIA1P42261 906 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 LBX1P52954 281 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 GDF10P55107 478 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 DAG1Q14118 895 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 XKRXQ6PP77 449 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 LENG8Q96PV6 779 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-202ENST00000356435 ALPK1Q96QP1 1244 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 IL4I1Q96RQ9 567 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 CD244Q9BZW8 370 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 OR51B5Q9H339 312 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 APOBEC3GQ9HC16 384 aaKnown RBP5.31□□□□□ -1.56
PTPRD-202ENST00000356435 PROM1O43490 865 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 CNTN5O94779 1100 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 MT-CO2P00403 227 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 IL3P08700 152 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 MAGP20916 626 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 ERVK-16P61578 105 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 CYBRD1Q53TN4 286 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 CATSPEREQ5SY80 951 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 SNX29P2Q8IUI4 249 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 SLC5A8Q8N695 610 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 LMO3Q8TAP4 145 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 THAP3Q8WTV1 239 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-202ENST00000356435 HDAC2Q92769 488 aaKnown RBP5.31□□□□□ -1.56
PTPRD-202ENST00000356435 ASB9Q96DX5 294 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 MCHR1Q99705 422 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 RXFP3Q9NSD7 469 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 POMPQ9Y244 141 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 NAALAD2Q9Y3Q0 740 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 A0A1W2PQU0 124 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 SHOXO15266 292 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 FLRT2O43155 660 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 VNN1O95497 513 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 LATS1O95835 1130 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 TUBG1P23258 451 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 POU3F4P49335 361 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 CDH15P55291 814 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF33AQ06730 810 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 TMEM115Q12893 351 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-202ENST00000356435 SERINC3Q13530 473 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 MOGQ16653 247 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 FOXB2Q5VYV0 432 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 ARHGAP11AQ6P4F7 1023 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 TUBA3EQ6PEY2 450 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 DPY19L3Q6ZPD9 716 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 A0A0G2JPF8 293 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 ANKRD34BA5PLL1 514 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF860A6NHJ4 632 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 HEPACAM2A8MVW5 462 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 HNRNPCL3B7ZW38 293 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 HHLA1C9JL84 531 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 PHLPP1O60346 1717 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 HNRNPCL4P0DMR1 293 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 FRKP42685 505 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-202ENST00000356435 KCTD19Q17RG1 926 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms