RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 MAMDC4Q6UXC1 1216 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 MINDY2Q8NBR6 621 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 CCDC106Q9BWC9 280 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 ZNF350Q9GZX5 532 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 TUBA8Q9NY65 449 aaPredicted RBP12.65□□□□□ -0.38
SCN8A-202ENST00000355133 DNMT3AQ9Y6K1 912 aaPredicted RBP12.65□□□□□ -0.38
SCN8A-202ENST00000355133 LTN1O94822 1766 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 SNAP29O95721 258 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 E2F1Q01094 437 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 GALK2Q01415 458 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 C10orf62Q5T681 223 aaPredicted RBP12.65□□□□□ -0.38
SCN8A-202ENST00000355133 LIPKQ5VXJ0 399 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 MEDAGQ5VYS4 303 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 GLT8D1Q68CQ7 371 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 CHST14Q8NCH0 376 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 ZNF675Q8TD23 568 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 TMEM40Q8WWA1 233 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 C12orf43Q96C57 262 aaKnown RBP12.65□□□□□ -0.38
SCN8A-202ENST00000355133 MUS81Q96NY9 551 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 B4GALT7Q9UBV7 327 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 KCNS2Q9ULS6 477 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 BACE2Q9Y5Z0 518 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 ACTL7AQ9Y615 435 aa12.65□□□□□ -0.38
SCN8A-202ENST00000355133 TRAV6A0A075B6T7 132 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 SEC14L5O43304 696 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 STOMP27105 288 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 AK4P27144 223 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-202ENST00000355133 OXTRP30559 389 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 CTBP2P56545 445 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 PSMA6P60900 246 aaKnown RBP12.64□□□□□ -0.39
SCN8A-202ENST00000355133 ATP6AP1Q15904 470 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 TMPPEQ6ZT21 453 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 ZNF100Q8IYN0 542 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 TTC9BQ8N6N2 239 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 DTX3Q8N9I9 347 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 PSD4Q8NDX1 1056 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 OR56A3Q8NH54 315 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 ZDHHC1Q8WTX9 485 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 BOCQ9BWV1 1114 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 RMI1Q9H9A7 625 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 TIGARQ9NQ88 270 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 ZNF701Q9NV72 531 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-202ENST00000355133 PORP16435 677 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-202ENST00000355133 PRKCAP17252 672 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 MSX1P28360 303 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 OTX2P32243 289 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 PHC1P78364 1004 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 SIM1P81133 766 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-202ENST00000355133 PLEKHG7Q6ZR37 379 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 BOLLQ8N9W6 283 aaKnown RBP12.64□□□□□ -0.39
SCN8A-202ENST00000355133 PCDHGB6Q9Y5F9 930 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 AURKAO14965 403 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 IL1RNP18510 177 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 C5AR1P21730 350 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 GRIK2Q13002 908 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 ECH1Q13011 328 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 ATXN7L3Q14CW9 347 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-202ENST00000355133 DEFB110Q30KQ9 67 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 WDR20Q8TBZ3 569 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 SEC14L1Q92503 715 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 ZNF778Q96MU6 729 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 MROQ9BYG7 248 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 SLC17A9Q9BYT1 436 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 RARRES3Q9UL19 164 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 IFT172Q9UG01 1749 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 ANKRD26Q9UPS8 1709 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-202ENST00000355133 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-202ENST00000355133 HOXA11P31270 313 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-202ENST00000355133 UQCRC1P31930 480 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 SHC2P98077 582 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 HHEXQ03014 270 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 EIF4HQ15056 248 aaKnown RBP12.64□□□□□ -0.39
SCN8A-202ENST00000355133 KCTD18Q6PI47 426 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-202ENST00000355133 LHFPL3Q86UP9 236 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 TREML1Q86YW5 311 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 SAMD12Q8N8I0 201 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 EHD1Q9H4M9 534 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 EPHA6Q9UF33 1036 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 SCP2D1Q9UJQ7 156 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 POU2F3Q9UKI9 436 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 CLEC4EQ9ULY5 219 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 CPNE6O95741 557 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 FDXRP22570 491 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 SPINT3P49223 89 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 SNU13P55769 128 aaKnown RBP12.64□□□□□ -0.39
SCN8A-202ENST00000355133 LRFN4Q6PJG9 635 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 NPWQ8N729 165 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 ZBTB8BQ8NAP8 495 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-202ENST00000355133 OR52B6Q8NGF0 335 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 PEX13Q92968 403 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 SLC2A11Q9BYW1 496 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 RETREG1Q9H6L5 497 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 NUFIP1Q9UHK0 495 aaKnown RBP12.64□□□□□ -0.39
SCN8A-202ENST00000355133 DHDHQ9UQ10 334 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 RICTORQ6R327 1708 aa12.64□□□□□ -0.39
SCN8A-202ENST00000355133 KCPQ6ZWJ8 1503 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 LMO7Q8WWI1 1683 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 SEMA4FO95754 770 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 ADRB3P13945 408 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms