RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 FATE1Q969F0 183 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 C7orf34Q96L11 122 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 SLC38A3Q99624 504 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 PKMYT1Q99640 499 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 OSMRQ99650 979 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 TREX2Q9BQ50 279 aaPredicted RBP7.76□□□□□ -1.17
ATG4A-201ENST00000343524 IER2Q9BTL4 223 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 DPH7Q9BTV6 452 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 DOHHQ9BU89 302 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 SPRTNQ9H040 489 aaPredicted RBP7.76□□□□□ -1.17
ATG4A-201ENST00000343524 ABCG5Q9H222 651 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 TMPRSS4Q9NRS4 437 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 THSD1Q9NS62 852 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 NUDT15Q9NV35 164 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 RBM22Q9NW64 420 aaKnown RBP eCLIP7.76□□□□□ -1.17
ATG4A-201ENST00000343524 GALPQ9UBC7 116 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 CYB5R1Q9UHQ9 305 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 ING1Q9UK53 422 aaPredicted RBP7.76□□□□□ -1.17
ATG4A-201ENST00000343524 PPIEQ9UNP9 301 aaKnown RBP7.76□□□□□ -1.17
ATG4A-201ENST00000343524 ZNF638Q14966 1978 aaKnown RBP7.75□□□□□ -1.17
ATG4A-201ENST00000343524 LINC00587B1AMM8 73 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 LINC01387J3KSC0 135 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 NUPL2O15504 423 aaKnown RBP7.75□□□□□ -1.17
ATG4A-201ENST00000343524 SGCEO43556 437 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 MAFKO60675 156 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 HPGDSO60760 199 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 SC5DO75845 299 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 ZNF3P17036 446 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 GPX2P18283 190 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 HNF1BP35680 557 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 HNMTP50135 292 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 HTR6P50406 440 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 SPIBQ01892 262 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 SP2Q02086 613 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 NRG1Q02297 640 aaPredicted RBP7.75□□□□□ -1.17
ATG4A-201ENST00000343524 CRYZQ08257 329 aaKnown RBP7.75□□□□□ -1.17
ATG4A-201ENST00000343524 C2orf80Q0P641 193 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 GTF2H2Q13888 395 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.75□□□□□ -1.17
ATG4A-201ENST00000343524 LIPKQ5VXJ0 399 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 PDE12Q6L8Q7 609 aaKnown RBP7.75□□□□□ -1.17
ATG4A-201ENST00000343524 GTF2H2CQ6P1K8 395 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 Q6ZPB1 254 aaPredicted RBP7.75□□□□□ -1.17
ATG4A-201ENST00000343524 USP30Q70CQ3 517 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 PRICKLE2Q7Z3G6 844 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 TRIM46Q7Z4K8 759 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 MILR1Q7Z6M3 343 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 DNAJB7Q7Z6W7 309 aaPredicted RBP7.75□□□□□ -1.17
ATG4A-201ENST00000343524 VTCN1Q7Z7D3 282 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 TMEM192Q8IY95 271 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 OR4C15Q8NGM1 316 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 OR10Q1Q8NGQ4 319 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 OR2T35Q8NGX2 323 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 FAM151AQ8WW52 585 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 TCEAL4Q96EI5 215 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 LRRC46Q96FV0 321 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 TPD52L3Q96J77 140 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 SFXN2Q96NB2 322 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 APOL5Q9BWW9 433 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 DUSP16Q9BY84 665 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 MS4A7Q9GZW8 240 aaPredicted RBP7.75□□□□□ -1.17
ATG4A-201ENST00000343524 WDCPQ9H6R7 721 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 SERHLQ9NQF3 203 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 PDGFCQ9NRA1 345 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 LATS2Q9NRM7 1088 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 DDIT4Q9NX09 232 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 MED11Q9P086 117 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 MARCH4Q9P2E8 410 aaPredicted RBP7.75□□□□□ -1.17
ATG4A-201ENST00000343524 NDOR1Q9UHB4 597 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 TRPS1Q9UHF7 1281 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 UBQLN1Q9UMX0 589 aaKnown RBP7.75□□□□□ -1.17
ATG4A-201ENST00000343524 GABRQQ9UN88 632 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 NCOR1O75376 2440 aa7.75□□□□□ -1.17
ATG4A-201ENST00000343524 TRAV6A0A075B6T7 132 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 NCF1BA6NI72 391 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 NCF1CA8MVU1 366 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 ARHGEF33A8MVX0 844 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 TLR4O00206 839 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 B4GALT5O43286 388 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 AKAP8O43823 692 aaKnown RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 RAD1O60671 282 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 PRMT3O60678 531 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 SDC3O75056 442 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 FCER2P06734 321 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 JUPP14923 745 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 PPP3CBP16298 524 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 RHCEP18577 417 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 HLA-DPA1P20036 260 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 GALP22466 123 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 MAPK3P27361 379 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 CSKP41240 450 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 PNPLA4P41247 253 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 CAPZA2P47755 286 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 VEGFCP49767 419 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 MMP16P51512 607 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 RENBPP51606 427 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 AGFG1P52594 562 aaKnown RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 CRISP1P54107 249 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 WNT4P56705 351 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 IL2P60568 153 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms