RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 CRYZQ08257 329 aaKnown RBP11.3□□□□□ -0.6
SHANK2-201ENST00000338508 KDELC1Q6UW63 502 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 TRAM1L1Q8N609 369 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 MGAT4CQ9UBM8 478 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 ASB3Q9Y575 518 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 RNF225M0QZC1 329 aaPredicted RBP11.3□□□□□ -0.6
SHANK2-201ENST00000338508 ACOT7O00154 380 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 LEFTY1O75610 366 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 SERPINA7P05543 415 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 TMEM225BP0DP42 221 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 FOSL1P15407 271 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 ELK4P28324 431 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 RPS26P62854 115 aaKnown RBP11.3□□□□□ -0.6
SHANK2-201ENST00000338508 RPS21P63220 83 aaKnown RBP11.3□□□□□ -0.6
SHANK2-201ENST00000338508 PIGFQ07326 219 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 GALNT1Q10472 559 aaPredicted RBP11.3□□□□□ -0.6
SHANK2-201ENST00000338508 BCL2L15Q5TBC7 163 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 CPNE8Q86YQ8 564 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.3□□□□□ -0.6
SHANK2-201ENST00000338508 FAM83CQ9BQN1 747 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 SYT4Q9H2B2 425 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 ZNF355PQ9NSJ1 428 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 GABRDO14764 452 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 HLA-DPB1P04440 258 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 ARG2P78540 354 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 NSDHLQ15738 373 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 TPRG1Q6ZUI0 275 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 PFDN5Q99471 154 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 HEMK1Q9Y5R4 338 aaPredicted RBP11.3□□□□□ -0.6
SHANK2-201ENST00000338508 CDH10Q9Y6N8 788 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 IGLON5A6NGN9 336 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 DEFB110Q30KQ9 67 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 AARDQ4LEZ3 155 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 BBS1Q8NFJ9 593 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 BBS10Q8TAM1 723 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 C15orf40Q8WUR7 153 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 G6PC3Q9BUM1 346 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 NSUN3Q9H649 340 aaKnown RBP11.3□□□□□ -0.6
SHANK2-201ENST00000338508 HTR3BO95264 441 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 KNG1P01042 644 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 FRKP42685 505 aaPredicted RBP11.3□□□□□ -0.6
SHANK2-201ENST00000338508 C22orf39Q6P5X5 142 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 TM9SF4Q92544 642 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 FKRPQ9H9S5 495 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 PRELID1Q9Y255 219 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 OR1A2Q9Y585 309 aa11.3□□□□□ -0.6
SHANK2-201ENST00000338508 SH3PXD2BA1X283 911 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 M0R233 179 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 EPHA4P54764 986 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 TRAM2Q15035 370 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 BCL2A1Q16548 175 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 KIAA0930Q6ICG6 404 aaPredicted RBP11.29□□□□□ -0.6
SHANK2-201ENST00000338508 CARM1Q86X55 608 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 DCUN1D3Q8IWE4 304 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 OR52E2Q8NGJ4 325 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 C9orf43Q8TAL5 461 aaPredicted RBP11.29□□□□□ -0.6
SHANK2-201ENST00000338508 SYT17Q9BSW7 474 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 ACTR6Q9GZN1 396 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 PRMT8Q9NR22 394 aaPredicted RBP11.29□□□□□ -0.6
SHANK2-201ENST00000338508 C2orf42Q9NWW7 574 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 DNAJB11Q9UBS4 358 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 GJD2Q9UKL4 321 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 MYH9P35579 1960 aaKnown RBP11.29□□□□□ -0.6
SHANK2-201ENST00000338508 VSTM2BA6NLU5 285 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 H3BML4 177 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 SULT1B1O43704 296 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 STK17BO94768 372 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 CHRNEQ04844 493 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 OR52W1Q6IF63 320 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 FTMTQ8N4E7 242 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 MKLN1Q9UL63 735 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 NOTOA8MTQ0 251 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 H7C2Y5 167 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 ZIC2O95409 532 aaPredicted RBP11.29□□□□□ -0.6
SHANK2-201ENST00000338508 IFNA4P05014 189 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 F8A1P23610 371 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 FAM214AQ32MH5 1076 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 KRTCAP2Q8N6L1 136 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 NEIL3Q8TAT5 605 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 PKP2Q99959 881 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 SULT4A1Q9BR01 284 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 ST6GALNAC5Q9BVH7 336 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 CDH20Q9HBT6 801 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 TMEM100Q9NV29 134 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 MED16Q9Y2X0 877 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 ZNF821O75541 412 aaPredicted RBP11.29□□□□□ -0.6
SHANK2-201ENST00000338508 CHRNB2P17787 502 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 STT3AP46977 705 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 GINS1Q14691 196 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 PON2Q15165 354 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 SMAD2Q15796 467 aaKnown RBP11.29□□□□□ -0.6
SHANK2-201ENST00000338508 NRROSQ86YC3 692 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 ARHGAP12Q8IWW6 846 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 PRR22Q8IZ63 422 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 SORCS1Q8WY21 1168 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 INPP4AQ96PE3 977 aaPredicted RBP11.29□□□□□ -0.6
SHANK2-201ENST00000338508 RXFP3Q9NSD7 469 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 HSBP1L1C9JCN9 74 aa11.29□□□□□ -0.6
SHANK2-201ENST00000338508 RNGTTO60942 597 aaKnown RBP11.29□□□□□ -0.6
SHANK2-201ENST00000338508 BEST1O76090 585 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms