RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 LRIT1Q9P2V4 623 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 MKLN1Q9UL63 735 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 MED31Q9Y3C7 131 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 FOXE1O00358 373 aaPredicted RBP13.01□□□□□ -0.33
DDX54-202ENST00000314045 RNASET2O00584 256 aaKnown RBP13.01□□□□□ -0.33
DDX54-202ENST00000314045 KHNYNO15037 678 aaKnown RBP13.01□□□□□ -0.33
DDX54-202ENST00000314045 NADKO95544 446 aaPredicted RBP13.01□□□□□ -0.33
DDX54-202ENST00000314045 CISD3P0C7P0 127 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 ARMC4Q5T2S8 1044 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 PDZK1Q5T2W1 519 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 TESCQ96BS2 214 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 SLC25A36Q96CQ1 311 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 SH3YL1Q96HL8 342 aaPredicted RBP13.01□□□□□ -0.33
DDX54-202ENST00000314045 ZNF419Q96HQ0 510 aaPredicted RBP13.01□□□□□ -0.33
DDX54-202ENST00000314045 C1QTNF2Q9BXJ5 285 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 PRRG4Q9BZD6 226 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 SERHL2Q9H4I8 314 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 SERHLQ9NQF3 203 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 STARD5Q9NSY2 213 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 ABI3Q9P2A4 366 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 RDH16O75452 317 aa13□□□□□ -0.33
DDX54-202ENST00000314045 SNAP29O95721 258 aa13□□□□□ -0.33
DDX54-202ENST00000314045 KRT8P05787 483 aa13□□□□□ -0.33
DDX54-202ENST00000314045 PSMA1P25786 263 aaKnown RBP13□□□□□ -0.33
DDX54-202ENST00000314045 AHRP35869 848 aa13□□□□□ -0.33
DDX54-202ENST00000314045 MAZP56270 477 aaKnown RBP13□□□□□ -0.33
DDX54-202ENST00000314045 CAMK1Q14012 370 aa13□□□□□ -0.33
DDX54-202ENST00000314045 HIST2H2ABQ8IUE6 130 aaPredicted RBP13□□□□□ -0.33
DDX54-202ENST00000314045 CCDC103Q8IW40 242 aa13□□□□□ -0.33
DDX54-202ENST00000314045 KBTBD2Q8IY47 623 aa13□□□□□ -0.33
DDX54-202ENST00000314045 METTL4Q8N3J2 472 aa13□□□□□ -0.33
DDX54-202ENST00000314045 C19orf18Q8NEA5 215 aa13□□□□□ -0.33
DDX54-202ENST00000314045 SUN3Q8TAQ9 357 aa13□□□□□ -0.33
DDX54-202ENST00000314045 FAM174AQ8TBP5 190 aa13□□□□□ -0.33
DDX54-202ENST00000314045 NETO1Q8TDF5 533 aa13□□□□□ -0.33
DDX54-202ENST00000314045 STON2Q8WXE9 905 aa13□□□□□ -0.33
DDX54-202ENST00000314045 RIT1Q92963 219 aa13□□□□□ -0.33
DDX54-202ENST00000314045 MAP10Q9P2G4 905 aa13□□□□□ -0.33
DDX54-202ENST00000314045 HS3ST3A1Q9Y663 406 aa13□□□□□ -0.33
DDX54-202ENST00000314045 ANTXRLA6NF34 631 aa13□□□□□ -0.33
DDX54-202ENST00000314045 FBP2O00757 339 aa13□□□□□ -0.33
DDX54-202ENST00000314045 CD160O95971 181 aa13□□□□□ -0.33
DDX54-202ENST00000314045 NUDT6P53370 316 aa13□□□□□ -0.33
DDX54-202ENST00000314045 SLC30A6Q6NXT4 461 aa13□□□□□ -0.33
DDX54-202ENST00000314045 FIGNL1Q6PIW4 674 aa13□□□□□ -0.33
DDX54-202ENST00000314045 CACTIN-AS1Q8N1I8 211 aa13□□□□□ -0.33
DDX54-202ENST00000314045 SMPDL3BQ92485 455 aa13□□□□□ -0.33
DDX54-202ENST00000314045 SLC6A18Q96N87 628 aa13□□□□□ -0.33
DDX54-202ENST00000314045 MAPKAP1Q9BPZ7 522 aa13□□□□□ -0.33
DDX54-202ENST00000314045 PLA2G2FQ9BZM2 168 aa13□□□□□ -0.33
DDX54-202ENST00000314045 ZDHHC5Q9C0B5 715 aa13□□□□□ -0.33
DDX54-202ENST00000314045 ZNF451Q9Y4E5 1061 aa13□□□□□ -0.33
DDX54-202ENST00000314045 TLR4O00206 839 aa13□□□□□ -0.33
DDX54-202ENST00000314045 TNFRSF10CO14798 259 aa13□□□□□ -0.33
DDX54-202ENST00000314045 AQP9O43315 295 aa13□□□□□ -0.33
DDX54-202ENST00000314045 NSDHLQ15738 373 aa13□□□□□ -0.33
DDX54-202ENST00000314045 FAM217AQ8IXS0 508 aa13□□□□□ -0.33
DDX54-202ENST00000314045 OR52P1PQ8NH57 321 aa13□□□□□ -0.33
DDX54-202ENST00000314045 MAELQ96JY0 434 aaKnown RBP13□□□□□ -0.33
DDX54-202ENST00000314045 ZNF354BQ96LW1 612 aa13□□□□□ -0.33
DDX54-202ENST00000314045 STRADBQ9C0K7 418 aa13□□□□□ -0.33
DDX54-202ENST00000314045 SOX17Q9H6I2 414 aaPredicted RBP13□□□□□ -0.33
DDX54-202ENST00000314045 NCDNQ9UBB6 729 aa13□□□□□ -0.33
DDX54-202ENST00000314045 RPL36Q9Y3U8 105 aaKnown RBP13□□□□□ -0.33
DDX54-202ENST00000314045 BNC1Q01954 994 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 KRR1Q13601 381 aaKnown RBP12.99□□□□□ -0.33
DDX54-202ENST00000314045 COLEC12Q5KU26 742 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 PIP5KL1Q5T9C9 394 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 NUP54Q7Z3B4 507 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 OR2L3Q8NG85 312 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 LGR4Q9BXB1 951 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 FOXQ1Q9C009 403 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 RBBP6Q7Z6E9 1792 aaKnown RBP12.99□□□□□ -0.33
DDX54-202ENST00000314045 PEX12O00623 359 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 TRMUO75648 421 aaKnown RBP12.99□□□□□ -0.33
DDX54-202ENST00000314045 RCBTB2O95199 551 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 CH25HO95992 272 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 PTNP21246 168 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 PTGER1P34995 402 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 KIAA1211LQ6NV74 962 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 OAFQ86UD1 273 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 SNX33Q8WV41 574 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 TSSK6Q9BXA6 273 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 YTHDF1Q9BYJ9 559 aaKnown RBP12.99□□□□□ -0.33
DDX54-202ENST00000314045 KLRF1Q9NZS2 232 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 ASB1Q9Y576 335 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 DICER1Q9UPY3 1922 aaKnown RBP12.99□□□□□ -0.33
DDX54-202ENST00000314045 RETP07949 1114 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 IFI30P13284 250 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 IST1P53990 364 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 DCTN2Q13561 401 aaKnown RBP12.99□□□□□ -0.33
DDX54-202ENST00000314045 GPR18Q14330 331 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 NPTX1Q15818 432 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 PYCR3Q53H96 274 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 KIAA1614Q5VZ46 1190 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 CYHR1Q6ZMK1 362 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 RNF111Q6ZNA4 994 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 KIAA1958Q8N8K9 716 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 GATSQ8NAP1 163 aa12.99□□□□□ -0.33
DDX54-202ENST00000314045 MRGPRX3Q96LB0 322 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms