RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 BEST3Q8N1M1 668 aa18.5■□□□□ 0.55
VEGFB-201ENST00000309422 OR1N1Q8NGS0 311 aa18.5■□□□□ 0.55
VEGFB-201ENST00000309422 SLC2A12Q8TD20 617 aa18.5■□□□□ 0.55
VEGFB-201ENST00000309422 PSMF1Q92530 271 aa18.5■□□□□ 0.55
VEGFB-201ENST00000309422 ANKRD9Q96BM1 317 aaPredicted RBP18.5■□□□□ 0.55
VEGFB-201ENST00000309422 APIPQ96GX9 242 aa18.5■□□□□ 0.55
VEGFB-201ENST00000309422 C5orf34Q96MH7 638 aa18.5■□□□□ 0.55
VEGFB-201ENST00000309422 LRTM1Q9HBL6 345 aa18.5■□□□□ 0.55
VEGFB-201ENST00000309422 C1orf109Q9NX04 203 aa18.5■□□□□ 0.55
VEGFB-201ENST00000309422 LUZP4Q9P127 313 aa18.5■□□□□ 0.55
VEGFB-201ENST00000309422 PCDHA9Q9Y5H5 950 aa18.5■□□□□ 0.55
VEGFB-201ENST00000309422 SMG1Q96Q15 3661 aaKnown RBP18.49■□□□□ 0.55
VEGFB-201ENST00000309422 GABRR3A8MPY1 467 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 SEC22BO75396 215 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 ERAL1O75616 437 aaKnown RBP18.49■□□□□ 0.55
VEGFB-201ENST00000309422 SLC35E2P0CK97 266 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 CHN1P15882 459 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 NT5EP21589 574 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 MAPK1P28482 360 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 AGBL2Q5U5Z8 902 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 GALNT18Q6P9A2 607 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 RNF165Q6ZSG1 346 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 SLC29A4Q7RTT9 530 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 GALNT12Q8IXK2 581 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 KIF2BQ8N4N8 673 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 TMEM156Q8N614 296 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 MGARPQ8TDB4 240 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 HAS2Q92819 552 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 TMEM125Q96AQ2 219 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 CDCP1Q9H5V8 836 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 ZBTB20Q9HC78 741 aaPredicted RBP18.49■□□□□ 0.55
VEGFB-201ENST00000309422 AGPAT4Q9NRZ5 378 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 UTS2RQ9UKP6 389 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 PPIEQ9UNP9 301 aaKnown RBP18.49■□□□□ 0.55
VEGFB-201ENST00000309422 WBP11Q9Y2W2 641 aaKnown RBP18.49■□□□□ 0.55
VEGFB-201ENST00000309422 TMED5Q9Y3A6 229 aa18.49■□□□□ 0.55
VEGFB-201ENST00000309422 SPTA1P02549 2419 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 MYOCOSA0A1B0GUC4 107 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 TGFBR3LH3BV60 316 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 J3QKU1 62 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 WDPCPO95876 746 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 FGF4P08620 206 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 IL3P08700 152 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 CD46P15529 392 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 CSNK2A2P19784 350 aaPredicted RBP18.48■□□□□ 0.55
VEGFB-201ENST00000309422 XKP51811 444 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 INAQ16352 499 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 H3F3CQ6NXT2 135 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 SLC48A1Q6P1K1 146 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 RNF111Q6ZNA4 994 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 FAM98AQ8NCA5 519 aaKnown RBP18.48■□□□□ 0.55
VEGFB-201ENST00000309422 NFAM1Q8NET5 270 aaPredicted RBP18.48■□□□□ 0.55
VEGFB-201ENST00000309422 CPT1CQ8TCG5 803 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 THAP3Q8WTV1 239 aaPredicted RBP18.48■□□□□ 0.55
VEGFB-201ENST00000309422 FBXL20Q96IG2 436 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 PPP3R2Q96LZ3 170 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 VIPAS39Q9H9C1 493 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 PLA2G3Q9NZ20 509 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 DLGAP4Q9Y2H0 992 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 POLR3HQ9Y535 204 aaPredicted RBP18.48■□□□□ 0.55
VEGFB-201ENST00000309422 CCDC88CQ9P219 2028 aa18.48■□□□□ 0.55
VEGFB-201ENST00000309422 PORP16435 677 aaPredicted RBP18.47■□□□□ 0.55
VEGFB-201ENST00000309422 GALNSP34059 522 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 CYB561P49447 251 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 TNFSF10P50591 281 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 SLC18A1P54219 525 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 ABCE1P61221 599 aaKnown RBP18.47■□□□□ 0.55
VEGFB-201ENST00000309422 RPL38P63173 70 aaKnown RBP18.47■□□□□ 0.55
VEGFB-201ENST00000309422 STX3Q13277 289 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 SPRED3Q2MJR0 410 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 GALNTL6Q49A17 601 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 ATP6AP1LQ52LC2 224 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 COLEC12Q5KU26 742 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 HLA-DQA1Q5Y7H0 255 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 ATG16L1Q676U5 607 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 FAM180AQ6UWF9 173 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 IKBIPQ70UQ0 350 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 TMEM178AQ8NBL3 297 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 APCDD1LQ8NCL9 501 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 OR8K3Q8NH51 312 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 PTPMT1Q8WUK0 201 aaPredicted RBP18.47■□□□□ 0.55
VEGFB-201ENST00000309422 PPWD1Q96BP3 646 aaKnown RBP18.47■□□□□ 0.55
VEGFB-201ENST00000309422 TM4SF18Q96CE8 201 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 SIRT5Q9NXA8 310 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 DNAJC15Q9Y5T4 150 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 ATRXP46100 2492 aa18.47■□□□□ 0.55
VEGFB-201ENST00000309422 VPS4BO75351 444 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 SKAP2O75563 359 aaPredicted RBP18.46■□□□□ 0.55
VEGFB-201ENST00000309422 SORBS2O94875 1100 aaKnown RBP18.46■□□□□ 0.55
VEGFB-201ENST00000309422 F10P00742 488 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 LINC00032P0C843 101 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 CPMP14384 443 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 PLA2G2AP14555 144 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 PRPH2P23942 346 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 NTSP30990 170 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 SLC1A6P48664 564 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 CD97P48960 835 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 SSR4P51571 173 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 ERVK-8P63133 956 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 ZNF267Q14586 743 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms