RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ART1P52961 327 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 POU4F1Q01851 419 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 PCDH1Q08174 1060 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 CHIT1Q13231 466 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 TBCCQ15814 346 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 PDK4Q16654 411 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 MPEG1Q2M385 716 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 KRTAP21-3Q3LHN1 58 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 UBAP2Q5T6F2 1119 aaKnown RBP8.24□□□□□ -1.09
TPM3-201ENST00000271850 NDUFAF5Q5TEU4 345 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 PRAMEF20Q5VT98 475 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 SULT1C3Q6IMI6 304 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 B3GNT6Q6ZMB0 384 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 FAM47EQ6ZV65 393 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 SYDE1Q6ZW31 735 aaPredicted RBP8.24□□□□□ -1.09
TPM3-201ENST00000271850 ISCA2Q86U28 154 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 SLC22A16Q86VW1 577 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 TMEM200AQ86VY9 491 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 GPSM1Q86YR5 675 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 ZNF441Q8N8Z8 693 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 SNX31Q8N9S9 440 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 BBOF1Q8ND07 529 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 OR10G3Q8NGC4 313 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 NUBPLQ8TB37 319 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 PAQR8Q8TEZ7 354 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 UBTD2Q8WUN7 234 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 DAZLQ92904 295 aaKnown RBP8.24□□□□□ -1.09
TPM3-201ENST00000271850 KIAA1191Q96A73 305 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 NTNG2Q96CW9 530 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 SENP5Q96HI0 755 aaPredicted RBP8.24□□□□□ -1.09
TPM3-201ENST00000271850 KCNC2Q96PR1 638 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 RBBP8Q99708 897 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 SLC6A15Q9H2J7 730 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 OR51B5Q9H339 312 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 IGSF5Q9NSI5 407 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 SACM1LQ9NTJ5 587 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 GRHL1Q9NZI5 618 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 CNOT11Q9UKZ1 510 aaKnown RBP8.24□□□□□ -1.09
TPM3-201ENST00000271850 MRPS33Q9Y291 106 aaKnown RBP8.24□□□□□ -1.09
TPM3-201ENST00000271850 ABCA4P78363 2273 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 FREM3P0C091 2139 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 ARHGAP21Q5T5U3 1957 aa8.24□□□□□ -1.09
TPM3-201ENST00000271850 NINQ8N4C6 2090 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 HMX2A2RU54 273 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 EFCAB8A8MWE9 144 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 UBXN8O00124 270 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 ACOT7O00154 380 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 BCKDKO14874 412 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 CLGNO14967 610 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 TMPRSS11DO60235 418 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 SUSD5O60279 629 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 CCNT2O60583 730 aaKnown RBP8.23□□□□□ -1.09
TPM3-201ENST00000271850 EEDO75530 441 aaKnown RBP8.23□□□□□ -1.09
TPM3-201ENST00000271850 CTAG2O75638 210 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 FBXO45P0C2W1 286 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 TCP1P17987 556 aaKnown RBP8.23□□□□□ -1.09
TPM3-201ENST00000271850 ZFP36L2P47974 494 aaKnown RBP8.23□□□□□ -1.09
TPM3-201ENST00000271850 FOLH1Q04609 750 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 STX4Q12846 297 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 EFTUD2Q15029 972 aaKnown RBP eCLIP8.23□□□□□ -1.092e-18■■■■□ 20.8
TPM3-201ENST00000271850 EBPQ15125 230 aaKnown RBP8.23□□□□□ -1.09
TPM3-201ENST00000271850 TRADDQ15628 312 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 CDKL4Q5MAI5 379 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 C1orf185Q5T7R7 199 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 FNDC7Q5VTL7 733 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 BICRALQ6AI39 1079 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 MRM1Q6IN84 353 aaKnown RBP8.23□□□□□ -1.09
TPM3-201ENST00000271850 RGS9BPQ6ZS82 235 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 GK5Q6ZS86 529 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 ACAD11Q709F0 780 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 ZZZ3Q8IYH5 903 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 LRRC25Q8N386 305 aaPredicted RBP8.23□□□□□ -1.09
TPM3-201ENST00000271850 TCAIMQ8N3R3 496 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 OR7G3Q8NG95 312 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 EXT2Q93063 718 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 SPACA9Q96E40 222 aaPredicted RBP8.23□□□□□ -1.09
TPM3-201ENST00000271850 SGCZQ96LD1 299 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 SH3GL2Q99962 352 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 ZNF559Q9BR84 538 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 TBCDQ9BTW9 1192 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 EFCAB11Q9BUY7 163 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 CD244Q9BZW8 370 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 ALG9Q9H6U8 611 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 COPS7BQ9H9Q2 264 aaPredicted RBP8.23□□□□□ -1.09
TPM3-201ENST00000271850 DLL4Q9NR61 685 aa8.23□□□□□ -1.09
TPM3-201ENST00000271850 CCM2LQ9NUG4 571 aaPredicted RBP8.23□□□□□ -1.09
TPM3-201ENST00000271850 A0A088AWK7 358 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 A0A0A6YYD5 115 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 TRGV5A0A0B4J1U4 118 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 FOXO6A8MYZ6 492 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 HCN1O60741 890 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 TRIM3O75382 744 aaPredicted RBP8.22□□□□□ -1.09
TPM3-201ENST00000271850 CT62P0C5K7 136 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 PCNAP12004 261 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 ZNF10P21506 573 aaPredicted RBP8.22□□□□□ -1.09
TPM3-201ENST00000271850 CPN2P22792 545 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 BSGP35613 385 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 MAN2A2P49641 1150 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 SLC37A1P57057 533 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 ATP6V0D1P61421 351 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms