RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 HAT1O14929 419 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 RNGTTO60942 597 aaKnown RBP17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 GADD45GO95257 159 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 C21orf33P30042 268 aaPredicted RBP17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 LIMS1P48059 325 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 TMED1Q13445 227 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 NDUFAF5Q5TEU4 345 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 TMEM92Q6UXU6 159 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 RAB42Q8N4Z0 105 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 OR5D16Q8NGK9 328 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 YIPF6Q96EC8 236 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 NT5DC2Q9H857 520 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 NEUROD4Q9HD90 331 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 SPHK1Q9NYA1 384 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 SLC17A4Q9Y2C5 497 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 FAM32AQ9Y421 112 aaKnown RBP17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 WDFY4Q6ZS81 3184 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 TBC1D3DA0A087WVF3 549 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 TBC1D3IA0A087WXS9 549 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 TBC1D3EA0A087X179 549 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 TBC1D3KA0A087X1G2 549 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 TBC1D3FA6NER0 549 aaPredicted RBP17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 GPR89AB7ZAQ6 455 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 TBC1D3LB9A6J9 549 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 PLRG1O43660 514 aaKnown RBP17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 SEMA7AO75326 666 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 CLPXO76031 633 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 GABARAPO95166 117 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 IFNW1P05000 195 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 TBC1D3HP0C7X1 549 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 GPR89BP0CG08 455 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 ALPPL2P10696 532 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 ANXA8P13928 327 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 FRKP42685 505 aaPredicted RBP17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 ADPRHP54922 357 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 PPP2CBP62714 309 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 PPP2CAP67775 309 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 CCINQ13939 588 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 COL9A2Q14055 689 aaPredicted RBP17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 ADPRMQ3LIE5 342 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 TMEM236Q5W0B7 351 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 TBC1D3GQ6DHY5 549 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 TBC1D3CQ6IPX1 549 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 PRSS48Q7RTY5 328 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 RBM45Q8IUH3 476 aaKnown RBP17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 P3H2Q8IVL5 708 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 TBC1D3Q8IZP1 549 aaPredicted RBP17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 APOBEC4Q8WW27 367 aaKnown RBP17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 QRFPRQ96P65 431 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 TIMM29Q9BSF4 260 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 DDX31Q9H8H2 851 aaKnown RBP17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 A4GALTQ9NPC4 353 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 POFUT2Q9Y2G5 429 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 CORINQ9Y5Q5 1042 aa17.72■□□□□ 0.43
PDLIM4-201ENST00000253754 PRAMEF27A3QJZ7 478 aa17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 TBX19O60806 448 aa17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 PEBP1P30086 187 aaKnown RBP17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 SERPINB1P30740 379 aa17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 VBP1P61758 197 aa17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 ZNF750Q32MQ0 723 aa17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 SYT6Q5T7P8 510 aaPredicted RBP17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 HMGN2P46Q86SG4 172 aa17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 SLC15A4Q8N697 577 aa17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 AQP11Q8NBQ7 271 aa17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 OR8K5Q8NH50 307 aa17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 PHF10Q8WUB8 498 aaKnown RBP17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 MRGPRX1Q96LB2 322 aa17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 SIGLEC11Q96RL6 698 aa17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 GLIPR2Q9H4G4 154 aa17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 FGF22Q9HCT0 170 aa17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 MRPS30Q9NP92 439 aaKnown RBP17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 ZNF226Q9NYT6 803 aa17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 CA5BQ9Y2D0 317 aa17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 HEATR5BQ9P2D3 2071 aa17.71■□□□□ 0.43
PDLIM4-201ENST00000253754 TOR1BO14657 336 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 CCNB2O95067 398 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 GASTP01350 101 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 GLULP15104 373 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 TGFBR1P36897 503 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 CCT3P49368 545 aaKnown RBP17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 OCA2Q04671 838 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 HYAL2Q12891 473 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 TDGQ13569 410 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 SYPL1Q16563 259 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 MOGQ16653 247 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 KIAA1324Q6UXG2 1013 aaKnown RBP17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 OR2L8Q8NGY9 312 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 VANGL1Q8TAA9 524 aaPredicted RBP17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 FNDC8Q8TC99 324 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 RPL3LQ92901 407 aaKnown RBP17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 ZBED6CLQ96FA7 236 aaPredicted RBP17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 COPS4Q9BT78 406 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 ALOXE3Q9BYJ1 711 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 CD93Q9NPY3 652 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 TRBV4-1A0A0J9YWV2 114 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 A0A1W2PS29 197 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 CLEC3AO75596 197 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 MFN2O95140 757 aa17.7■□□□□ 0.42
PDLIM4-201ENST00000253754 EML2O95834 649 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms