RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 BivmQ8CBX9 502 aa8.63□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Scnm1Q8K136 229 aa8.63□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Ddx52Q8K301 598 aaKnown RBP8.63□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Spata4Q8K3V1 295 aa8.63□□□□□ -1.03
Upf3b-201ENSMUST00000076265 IntS13Q8QZV7 732 aa8.63□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Klhdc8aQ91XA8 350 aa8.63□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Thyn1Q91YJ3 226 aa8.63□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Scd3Q99PL7 359 aa8.63□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Nicn1Q9CQM0 213 aa8.63□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Golt1bQ9CR60 138 aa8.63□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Ceacam11Q9D0Z8 303 aa8.63□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Egfl6Q9JJZ5 550 aa8.63□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Fam89bQ9QUI1 189 aa8.63□□□□□ -1.03
Upf3b-201ENSMUST00000076265 ItgaxQ9QXH4 1169 aa8.63□□□□□ -1.03
Upf3b-201ENSMUST00000076265 CompQ9R0G6 755 aa8.63□□□□□ -1.03
Upf3b-201ENSMUST00000076265 CpqQ9WVJ3 470 aa8.63□□□□□ -1.03
Upf3b-201ENSMUST00000076265 CcniQ9Z2V9 377 aa8.63□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Peak1Q69Z38 1735 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Scgb2b21A0A087WQA9 112 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Gm13276A0A087WR18 182 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Slc6a16A0A1L1SR47 742 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Gm13088A2AGW6 460 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Hsf3D0VYS2 492 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Gm7945F6QI24 236 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Capn5O08688 640 aaKnown RBP8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Impa1O55023 277 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Slc6a2O55192 617 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Cops4O88544 406 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Mtnd1P03888 318 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Usp53P15975 1069 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 UoxP25688 303 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Meox1P32442 253 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 CdaP56389 146 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Adamts10P58459 1104 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Fkbp14P59024 211 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Timm10P62073 90 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Kcnj3P63250 501 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 St8sia5P70126 412 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 CenptQ3TJM4 515 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Chi3l1Q61362 389 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Mc2rQ64326 296 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Abhd17bQ7M759 288 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Olfr1472Q7TQQ9 314 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Olfr1058Q7TR74 316 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Olfr384Q7TRX8 312 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Ifna12Q80SS5 189 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Abhd16bQ80YU0 474 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 OacylQ8BML2 685 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Rsl1d1Q8BVY0 452 aaKnown RBP8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Ncr1Q8C567 325 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Pih1h3bQ8C6P5 218 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Apoa5Q8C7G5 368 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 BC106179Q8C9L1 186 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Ccdc28aQ8CEI3 192 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 V1ra11Q8R2E6 318 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Chrnb4Q8R493 495 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Olfr846Q8VET8 312 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Csdc2Q91YQ3 154 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 LiasQ99M04 373 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Hspbp1Q99P31 357 aaKnown RBP8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Ilf2Q9CXY6 390 aaKnown RBP8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Calml3Q9D6P8 149 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Syt11Q9R0N3 430 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Syt9Q9R0N9 491 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Angpt4Q9WVH6 509 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Lrrc38A2VDH3 298 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Gm13271B1AYH9 182 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Gpr27O54897 379 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 SgceO70258 437 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 GzmfP08883 248 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 En1P09065 401 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 PtcraP0C6B2 199 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Vipr2P41588 437 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 GastP48757 101 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 DtymkP97930 212 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 MedagQ14BA6 303 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Gpat2Q14DK4 801 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 B3gnt6Q3USF0 391 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Gpr165Q3V3A3 455 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 PmelQ60696 626 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Ifit3Q64345 403 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Oxsr1Q6P9R2 527 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Dusp16Q6PCP3 660 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Tas2r107Q7M725 308 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Olfr1126Q7TR49 314 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Mppe1Q80XL7 396 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Nars2Q8BGV0 477 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Q8BHR8 331 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Prdm8Q8BZ97 687 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Pak5Q8C015 719 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Cers2Q924Z4 380 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Ctrb1Q9CR35 263 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Mis18aQ9CZJ6 204 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Serpinb1aQ9D154 379 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Tmem210Q9D2F0 147 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Trp53tg5Q9D976 238 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Q9DAD0 168 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Ern1Q9EQY0 977 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Cyp3a41aQ9JMA7 504 aa8.62□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Ccne2Q9Z238 404 aa8.62□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms