RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	ATN1	P54259	1190 aa	Predicted RBP	13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	SCARB2	Q14108	478 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	DOC2A	Q14183	400 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	FGFBP1	Q14512	234 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	MPPE1	Q53F39	396 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	ATAT1	Q5SQI0	421 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	COMMD7	Q86VX2	200 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	IQCF1	Q8N6M8	205 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	OR5AK3P	Q8NH89	298 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	KLHL6	Q8WZ60	621 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	DACT3	Q96B18	629 aa	Predicted RBP	13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	NELL2	Q99435	816 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	MRPL9	Q9BYD2	267 aa	Known RBP	13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	CWH43	Q9H720	699 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	BRD9	Q9H8M2	597 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	RFXAP	O00287	272 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	SCAMP2	O15127	329 aa	Known RBP	13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	ASMT	P46597	345 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	AVPR1B	P47901	424 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	PTPN5	P54829	565 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	FRMPD2B	Q6IN97	320 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	CRTC1	Q6UUV9	634 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	TMEM173	Q86WV6	379 aa	Predicted RBP	13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	TCEANC	Q8N8B7	351 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	ZNF680	Q8NEM1	530 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	OR4C15	Q8NGM1	316 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	LINC01599	Q8WXQ3	324 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	TMEM80	Q96HE8	168 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045	HDHD2	Q9H0R4	259 aa		13.72	□□□□□ -0.21
SYNRG-231	ENST00000622045		A0A1B0GVC2	190 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045		A6NIN4	97 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045		E7EQ34	232 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	CA12	O43570	354 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	LZTS3	O60299	673 aa	Predicted RBP	13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	TYW3	Q6IPR3	259 aa	Known RBP	13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	ADNP2	Q6IQ32	1131 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	B3GLCT	Q6Y288	498 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	CLP1	Q92989	425 aa	Known RBP	13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	C1QTNF6	Q9BXI9	259 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	LINC00597	Q9H2U6	94 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	MBD1	Q9UIS9	605 aa	Predicted RBP	13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	GOLGA4	Q13439	2230 aa	Known RBP	13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	OR2AG2	A6NM03	316 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	SEPT4	O43236	478 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	ORC5	O43913	435 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	TPST2	O60704	377 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	TP53	P04637	393 aa	Predicted RBP	13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	RPS25	P62851	125 aa	Known RBP	13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	ELAVL2	Q12926	359 aa	Known RBP	13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	CDKL4	Q5MAI5	379 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	GCNT6	Q5T4J0	391 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	OR2G6	Q5TZ20	316 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	TMEM65	Q6PI78	240 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	USP45	Q70EL2	814 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	THOC6	Q86W42	341 aa	Known RBP	13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	DCAF4L2	Q8NA75	395 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	TOR1AIP2	Q8NFQ8	470 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	DNAJA4	Q8WW22	397 aa	Predicted RBP	13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	TMEM245	Q9H330	911 aa		13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	NMNAT1	Q9HAN9	279 aa	Predicted RBP	13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	ZNF282	Q9UDV7	671 aa	Predicted RBP	13.71	□□□□□ -0.21
SYNRG-231	ENST00000622045	TRAV6	A0A075B6T7	132 aa		13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	SLC35F4	A4IF30	521 aa		13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	FADS2P1	A8MWK0	482 aa		13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	SYP	P08247	313 aa		13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	PRKACA	P17612	351 aa		13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	PRPH2	P23942	346 aa		13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	PCGF2	P35227	344 aa		13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	SLC6A12	P48065	614 aa		13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	CTBP2	P56545	445 aa		13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	DBP	Q10586	325 aa	Predicted RBP	13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	ZMYND11	Q15326	602 aa		13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	TRIM71	Q2Q1W2	868 aa	Known RBP	13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	LIX1L	Q8IVB5	337 aa		13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	SLC35A5	Q9BS91	424 aa		13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	TSSK6	Q9BXA6	273 aa		13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	CNOT2	Q9NZN8	540 aa	Known RBP	13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	LSM2	Q9Y333	95 aa	Known RBP	13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	KCNE2	Q9Y6J6	123 aa		13.71	□□□□□ -0.22
SYNRG-231	ENST00000622045	PRAMEF33	A0A0G2JMD5	474 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	TEX51	A0A1B0GUA7	166 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	CASK	O14936	926 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	INPPL1	O15357	1258 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	NUPL2	O15504	423 aa	Known RBP	13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	PRAMEF10	O60809	474 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	CYBA	P13498	195 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	GLUL	P15104	373 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	NAGA	P17050	411 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	ZNF157	P51786	506 aa	Predicted RBP	13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	PER3	P56645	1201 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	B4GALNT1	Q00973	533 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	RPA4	Q13156	261 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	C1D	Q13901	141 aa	Known RBP	13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	BCL2L15	Q5TBC7	163 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	TIGD3	Q6B0B8	471 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	SLC7A5P2	Q9GIP4	190 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	ZC4H2	Q9NQZ6	224 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	ACER3	Q9NUN7	267 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	TMEM161A	Q9NX61	479 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms