RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 ERI1Q8IV48 349 aaKnown RBP10.9□□□□□ -0.66
CLIP1-219ENST00000620786 MRPL43Q8N983 215 aaKnown RBP10.9□□□□□ -0.66
CLIP1-219ENST00000620786 OR52P1PQ8NH57 321 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 TMEM80Q96HE8 168 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 TMEM41AQ96HV5 264 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 ACTL7AQ9Y615 435 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 OR14I1A6ND48 311 aa10.9□□□□□ -0.67
CLIP1-219ENST00000620786 DPP6P42658 865 aa10.9□□□□□ -0.67
CLIP1-219ENST00000620786 HERV-K104P61576 105 aa10.9□□□□□ -0.67
CLIP1-219ENST00000620786 UNQ6126/PRO20091Q6UXV3 157 aa10.9□□□□□ -0.67
CLIP1-219ENST00000620786 BEND4Q6ZU67 534 aa10.9□□□□□ -0.67
CLIP1-219ENST00000620786 MSLNLQ96KJ4 702 aa10.9□□□□□ -0.67
CLIP1-219ENST00000620786 ZFYVE21Q9BQ24 234 aa10.9□□□□□ -0.67
CLIP1-219ENST00000620786 GPRC5BQ9NZH0 403 aa10.9□□□□□ -0.67
CLIP1-219ENST00000620786 MARCH4Q9P2E8 410 aaPredicted RBP10.9□□□□□ -0.67
CLIP1-219ENST00000620786 ACOX3O15254 700 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 NUAK1O60285 661 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 CCNKO75909 580 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 PROZP22891 400 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 SLC9A3P48764 834 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 ATP4BP51164 291 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 NKAPLQ5M9Q1 402 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 DUSP23Q9BVJ7 150 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 ERVK-18Q9QC07 812 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 NAV1Q8NEY1 1877 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 SOX9P48436 509 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 SIM1P81133 766 aaPredicted RBP10.89□□□□□ -0.67
CLIP1-219ENST00000620786 TYSND1Q2T9J0 566 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 KLHDC8AQ8IYD2 350 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 ALDH16A1Q8IZ83 802 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 CLEC1AQ8NC01 280 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 HUS1BQ8NHY5 278 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 SHKBP1Q8TBC3 707 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 HSPA12BQ96MM6 686 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 FN3KQ9H479 309 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 TRPV4Q9HBA0 871 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 DNAJC27Q9NZQ0 273 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 LOC100509620A0A075B734 347 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 GJE1A6NN92 205 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 RTCAO00442 366 aaKnown RBP10.89□□□□□ -0.67
CLIP1-219ENST00000620786 POLR1CO15160 346 aaPredicted RBP10.89□□□□□ -0.67
CLIP1-219ENST00000620786 ORC5O43913 435 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 PSKH1P11801 424 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 ITGB7P26010 798 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 TAS2R43P59537 309 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 PPP1R3AQ16821 1122 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 ZFP69Q49AA0 526 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 PIGWQ7Z7B1 504 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 BORCS6Q96GS4 357 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 CRB3Q9BUF7 120 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 ATXN7L1Q9ULK2 861 aaPredicted RBP10.89□□□□□ -0.67
CLIP1-219ENST00000620786 KCNS2Q9ULS6 477 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 A0A096LPI6 279 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 MT-ND5P03915 603 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 S1PR1P21453 382 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 SLC6A4P31645 630 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 CBLBQ13191 982 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 DSG2Q14126 1118 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 RCAN2Q14206 197 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 TECRLQ5HYJ1 363 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 MANEALQ5VSG8 457 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 LARP4Q71RC2 724 aaKnown RBP eCLIP10.89□□□□□ -0.67
CLIP1-219ENST00000620786 TCEAL4Q96EI5 215 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 PGAM5Q96HS1 289 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 ACTR3BQ9P1U1 418 aa10.89□□□□□ -0.67
CLIP1-219ENST00000620786 PTRH2Q9Y3E5 179 aaKnown RBP10.89□□□□□ -0.67
CLIP1-219ENST00000620786 hCG_1807616A0A1W2PRN6 198 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 FTCDNL1E5RQL4 147 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 TMX2-CTNND1H3BSU7 103 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 TOR1BO14657 336 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 PPM1BO75688 479 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 BPNT1O95861 308 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 ABRAXAS2Q15018 415 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 OR8K3Q8NH51 312 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 RHEBL1Q8TAI7 183 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 THAP4Q8WY91 577 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 DCBLD2Q96PD2 775 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 ITPAQ9BY32 194 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 SLC5A7Q9GZV3 580 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 PELI2Q9HAT8 420 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 LIPT1Q9Y234 373 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 ZNF35P13682 527 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 GGT2P36268 569 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 ALG10Q5BKT4 473 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 C6orf136Q5SQH8 315 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 CWF19L1Q69YN2 538 aaKnown RBP10.88□□□□□ -0.67
CLIP1-219ENST00000620786 PYHIN1Q6K0P9 492 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 ASB18Q6ZVZ8 466 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 ZNF440Q8IYI8 595 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 ACVR1CQ8NER5 493 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 LMO3Q8TAP4 145 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 BOCQ9BWV1 1114 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 ACTR10Q9NZ32 417 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 SARDHQ9UL12 918 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 ADAMTS5Q9UNA0 930 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 MBLAC1A4D2B0 266 aaPredicted RBP10.88□□□□□ -0.67
CLIP1-219ENST00000620786 PROM1O43490 865 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 AK1P00568 194 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 HMGCLP35914 325 aa10.88□□□□□ -0.67
CLIP1-219ENST00000620786 RPA4Q13156 261 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms