RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 NUP54Q7Z3B4 507 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PHF13Q86YI8 300 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SFTPA2Q8IWL1 248 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SPATA6LQ8N4H0 392 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 NIPA2Q8N8Q9 360 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 NECAB1Q8N987 351 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 NOA1Q8NC60 698 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 OR14A16Q8NHC5 309 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 DDB2Q92466 427 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 EXT2Q93063 718 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 RFKQ969G6 155 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 IGSF8Q969P0 613 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 MIB2Q96AX9 1013 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 DHX58Q96C10 678 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 C14orf79Q96F83 325 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SSX3Q99909 188 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CLSTN3Q9BQT9 956 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 GATA5Q9BWX5 397 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TSSK1BQ9BXA7 367 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 MAGIXQ9H6Y5 334 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TRMT1Q9NXH9 659 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 GTSE1Q9NYZ3 720 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 HACD3Q9P035 362 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF580Q9UK33 172 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PADI2Q9Y2J8 665 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 GPR179Q6PRD1 2367 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CITO14578 2027 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TRIM64CA6NLI5 447 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 H3BQF6 201 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CAPN9O14815 690 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 AP5Z1O43299 807 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 BUD23O43709 281 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 KLRC4O43908 158 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CLDN11O75508 207 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 GSRP00390 522 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 C9P02748 559 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ETS1P14921 441 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PSMC3P17980 439 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SRD5A1P18405 259 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ELAVL4P26378 380 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SSTR1P30872 391 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 MNDAP41218 407 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 KCNJ1P48048 391 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 NR2C2P49116 596 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 NDST2P52849 883 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC26A5P58743 744 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TAS2R38P59533 333 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 POLR2LP62875 67 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 IRX1P78414 480 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ROR2Q01974 943 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CCDC173Q0VFZ6 552 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TFDP2Q14188 446 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PTGR1Q14914 329 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 OASLQ15646 514 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SHROOM1Q2M3G4 852 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM174BQ3ZCQ3 159 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 FASTKD1Q53R41 847 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 FGD3Q5JSP0 725 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 RAET1GQ6H3X3 334 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PMF1Q6P1K2 205 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TTC23LQ6PF05 361 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 QSOX2Q6ZRP7 698 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 DENND5BQ6ZUT9 1274 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ARHGAP22Q7Z5H3 698 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 LONP2Q86WA8 852 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 C1orf52Q8N6N3 182 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 RTL3Q8N8U3 475 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SMYD1Q8NB12 490 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 OR7G3Q8NG95 312 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 OR52N4Q8NGI2 321 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 FIBINQ8TAL6 211 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 LNX1Q8TBB1 728 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 NELFBQ8WX92 580 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 COQ8BQ96D53 544 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 C5orf30Q96GV9 206 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ATP6V0BQ99437 205 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CMKLR1Q99788 373 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 NPFFR1Q9GZQ6 430 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 RBM38Q9H0Z9 239 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 DPEP2Q9H4A9 486 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 MVB12BQ9H7P6 319 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PALMDQ9NP74 551 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 RAB9BQ9NP90 201 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 NGBQ9NPG2 151 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 EQTNQ9NQ60 294 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 OLAHQ9NV23 265 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 MIOSQ9NXC5 875 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PKD2L2Q9NZM6 624 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 AIPL1Q9NZN9 384 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 COX16Q9P0S2 106 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 COPS7AQ9UBW8 275 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TBK1Q9UHD2 729 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 POU2F3Q9UKI9 436 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TMCO1Q9UM00 188 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 COLEC10Q9Y6Z7 277 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ATRXP46100 2492 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 A0A1B0GVM2 712 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 A0A1W2PQF6 199 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 hDV102S1A0JD36 115 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC22A23A1A5C7 686 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms