RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 RPTNQ6XPR3 784 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 SPNS3Q6ZMD2 512 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 CDH24Q86UP0 819 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 ZC3H7AQ8IWR0 971 aaKnown RBP12.5□□□□□ -0.41
CCDC40-205ENST00000571028 CA13Q8N1Q1 262 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 ZNF808Q8N4W9 903 aaPredicted RBP12.5□□□□□ -0.41
CCDC40-205ENST00000571028 ACOT4Q8N9L9 421 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 FAM47BQ8NA70 645 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 OR2Y1Q8NGV0 311 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 PPP1R36Q96LQ0 422 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 SERINC2Q96SA4 455 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 SLX1AQ9BQ83 275 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 CRB3Q9BUF7 120 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 ACPTQ9BZG2 426 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 ROGDIQ9GZN7 287 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 MANSC1Q9H8J5 431 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 INTS9Q9NV88 658 aaKnown RBP12.5□□□□□ -0.41
CCDC40-205ENST00000571028 ZDHHC2Q9UIJ5 367 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 MKL2Q9ULH7 1088 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 TSC22D4Q9Y3Q8 395 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 POLEQ07864 2286 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 DYNC1I1O14576 645 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 ALBP02768 609 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 KLK1P06870 262 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 RNH1P13489 461 aaKnown RBP12.49□□□□□ -0.41
CCDC40-205ENST00000571028 CAPN3P20807 821 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 HIST1H1TP22492 207 aaPredicted RBP12.49□□□□□ -0.41
CCDC40-205ENST00000571028 GRK2P25098 689 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 SERPINB5P36952 375 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 EMP2P54851 167 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 KCNK10P57789 538 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 CSTF3Q12996 717 aaKnown RBP12.49□□□□□ -0.41
CCDC40-205ENST00000571028 CUL3Q13618 768 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 ATG16L1Q676U5 607 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 NIPAL1Q6NVV3 410 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 CYP20A1Q6UW02 462 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 GFRALQ6UXV0 394 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 PPP1R32Q7Z5V6 425 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 TRIM42Q8IWZ5 723 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 CLYBLQ8N0X4 340 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 C1orf52Q8N6N3 182 aaKnown RBP12.49□□□□□ -0.41
CCDC40-205ENST00000571028 ZNF781Q8N8C0 355 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 OR6Y1Q8NGX8 325 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 SPSB2Q99619 263 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 MAPKAP1Q9BPZ7 522 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 TRIM8Q9BZR9 551 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 C20orf27Q9GZN8 174 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 C14orf105Q9NVL8 296 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 NMRK1Q9NWW6 199 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 AHSPQ9NZD4 102 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 VPS29Q9UBQ0 182 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 C3orf18Q9UK00 162 aa12.49□□□□□ -0.41
CCDC40-205ENST00000571028 NXT1Q9UKK6 140 aaKnown RBP12.49□□□□□ -0.41
CCDC40-205ENST00000571028 DIDO1Q9BTC0 2240 aaKnown RBP12.49□□□□□ -0.41
CCDC40-205ENST00000571028 CCDC168Q8NDH2 2452 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 MYOCOSA0A1B0GUC4 107 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 VSTM2BA6NLU5 285 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 CCL21O00585 134 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 ATP8B1O43520 1251 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 BMP10O95393 424 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 ONECUT2O95948 504 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 UMODP07911 640 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 KITP10721 976 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 CPN2P22792 545 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 BSGP35613 385 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 LIM2P55344 173 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 RAB38P57729 211 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 BTG2P78543 158 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 PDCD2Q16342 344 aaPredicted RBP12.48□□□□□ -0.41
CCDC40-205ENST00000571028 CCNYL2Q5T2Q4 361 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 C10orf62Q5T681 223 aaPredicted RBP12.48□□□□□ -0.41
CCDC40-205ENST00000571028 KANK2Q63ZY3 851 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 RIPOR1Q6ZS17 1223 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 COMMD6Q7Z4G1 85 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 NUDT13Q86X67 352 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 GBP7Q8N8V2 638 aaPredicted RBP12.48□□□□□ -0.41
CCDC40-205ENST00000571028 CHTF18Q8WVB6 975 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 TWIST2Q8WVJ9 160 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 ZNF75CPQ92670 426 aaPredicted RBP12.48□□□□□ -0.41
CCDC40-205ENST00000571028 TBC1D20Q96BZ9 403 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 APIPQ96GX9 242 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 CCDC120Q96HB5 630 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 CSF3RQ99062 836 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 MESP1Q9BRJ9 268 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 EBPLQ9BY08 206 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 SLC26A1Q9H2B4 701 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 TUBB1Q9H4B7 451 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 WDR54Q9H977 334 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 BRF2Q9HAW0 419 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 PNPOQ9NVS9 261 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 MARCOQ9UEW3 520 aaPredicted RBP12.48□□□□□ -0.41
CCDC40-205ENST00000571028 FBXL4Q9UKA2 621 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 RAP2CQ9Y3L5 183 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 DNAJC15Q9Y5T4 150 aa12.48□□□□□ -0.41
CCDC40-205ENST00000571028 AKAP9Q99996 3911 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 PCSK5Q92824 1860 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 IDSB3KWA1 339 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 SLC28A1O00337 649 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 PIP5K1BO14986 540 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 TMPRSS11DO60235 418 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms