RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 MS4A8Q9BY19 250 aa13□□□□□ -0.33
CDR2-204ENST00000564542 LIME1Q9H400 295 aa13□□□□□ -0.33
CDR2-204ENST00000564542 RASSF1Q9NS23 344 aa13□□□□□ -0.33
CDR2-204ENST00000564542 MOCS1Q9NZB8 636 aa13□□□□□ -0.33
CDR2-204ENST00000564542 BOKQ9UMX3 212 aaPredicted RBP13□□□□□ -0.33
CDR2-204ENST00000564542 SNX12Q9UMY4 172 aa13□□□□□ -0.33
CDR2-204ENST00000564542 EDARQ9UNE0 448 aa13□□□□□ -0.33
CDR2-204ENST00000564542 HSPB2A8KAH6 182 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 STK16O75716 305 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 IGKV3-11P04433 115 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 HIST1H1TP22492 207 aaPredicted RBP12.99□□□□□ -0.33
CDR2-204ENST00000564542 ATP5A1P25705 553 aaKnown RBP12.99□□□□□ -0.33
CDR2-204ENST00000564542 STT3AP46977 705 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 HSPA7P48741 367 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 SLC12A2P55011 1212 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 KCNJ2P63252 427 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 ID2Q02363 134 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 SNTB1Q13884 538 aaKnown RBP12.99□□□□□ -0.33
CDR2-204ENST00000564542 HSPB2Q16082 182 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 TMEM35AQ53FP2 167 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 FBXO48Q5FWF7 155 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 SULT1C3Q6IMI6 304 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 SYDE1Q6ZW31 735 aaPredicted RBP12.99□□□□□ -0.33
CDR2-204ENST00000564542 C9orf40Q8IXQ3 194 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 DND1Q8IYX4 353 aaKnown RBP12.99□□□□□ -0.33
CDR2-204ENST00000564542 SLC35F6Q8N357 371 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 LRRC25Q8N386 305 aaPredicted RBP12.99□□□□□ -0.33
CDR2-204ENST00000564542 FBXO36Q8NEA4 188 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 ALPK1Q96QP1 1244 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 ZFP64Q9NPA5 681 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 QPCTLQ9NXS2 382 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 ALKBH4Q9NXW9 302 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 CRIM1Q9NZV1 1036 aa12.99□□□□□ -0.33
CDR2-204ENST00000564542 FLNAP21333 2647 aaKnown RBP12.99□□□□□ -0.33
CDR2-204ENST00000564542 NCKAP5O14513 1909 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 AKAP6Q13023 2319 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 LRRC3CA6NJW4 275 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 RTCAO00442 366 aaKnown RBP12.98□□□□□ -0.33
CDR2-204ENST00000564542 SYT5O00445 386 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 DYRK3O43781 588 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 FGF17O60258 216 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 RFPL3SP0C7P2 107 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 EPORP19235 508 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 CPN2P22792 545 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 DNASE1P24855 282 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 UQCRC1P31930 480 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 MSH2P43246 934 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 ASCL1P50553 236 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 POU4F1Q01851 419 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 IRF8Q02556 426 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 FOXD4Q12950 439 aaPredicted RBP12.98□□□□□ -0.33
CDR2-204ENST00000564542 E2F2Q14209 437 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 FASTKD3Q14CZ7 662 aaKnown RBP12.98□□□□□ -0.33
CDR2-204ENST00000564542 TBCCQ15814 346 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 HIST2H2ACQ16777 129 aaPredicted RBP12.98□□□□□ -0.33
CDR2-204ENST00000564542 FLYWCH1Q4VC44 716 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 PRAMEF20Q5VT98 475 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 HIST2H2AA3Q6FI13 130 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 LYPD8Q6UX82 237 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 GPSM1Q86YR5 675 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 ULK2Q8IYT8 1036 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 SPATA6LQ8N4H0 392 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 SLC15A4Q8N697 577 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 RELL2Q8NC24 303 aaPredicted RBP12.98□□□□□ -0.33
CDR2-204ENST00000564542 PDPRQ8NCN5 879 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 BBOF1Q8ND07 529 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 NEIL3Q8TAT5 605 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 ZNF473Q8WTR7 871 aaKnown RBP12.98□□□□□ -0.33
CDR2-204ENST00000564542 ESAMQ96AP7 390 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 SENP5Q96HI0 755 aaPredicted RBP12.98□□□□□ -0.33
CDR2-204ENST00000564542 FBXL20Q96IG2 436 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 ART5Q96L15 291 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 DGAT2Q96PD7 388 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 SH3GL2Q99962 352 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 ACKR4Q9NPB9 350 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 RYDENQ9NUL5 291 aaKnown RBP12.98□□□□□ -0.33
CDR2-204ENST00000564542 ACANP16112 2415 aa12.98□□□□□ -0.33
CDR2-204ENST00000564542 VPS13CQ709C8 3753 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 A6NNC1 897 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 DVL2O14641 736 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 PROM1O43490 865 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 FAM155BO75949 473 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 SEC31AO94979 1220 aaKnown RBP12.97□□□□□ -0.33
CDR2-204ENST00000564542 FBXO45P0C2W1 286 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 CCDC166P0CW27 439 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 CD1DP15813 335 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 SERPINB1P30740 379 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 CASP2P42575 452 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 SSR2P43308 183 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 ATP6V0D1P61421 351 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 PLIN5Q00G26 463 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 DR1Q01658 176 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 PDIA2Q13087 525 aaKnown RBP12.97□□□□□ -0.33
CDR2-204ENST00000564542 CHIT1Q13231 466 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 BIKQ13323 160 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 OR4D1Q15615 310 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 AP5B1Q2VPB7 878 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 FBXL19-AS1Q494R0 122 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 SEM1Q6ZVN7 128 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 LRRC70Q7Z2Q7 622 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms