RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 FOXD4Q12950 439 aaPredicted RBP17.21■□□□□ 0.35
NME3-204ENST00000563498 BIKQ13323 160 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 DOC2AQ14183 400 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 PAGE2BQ5JRK9 111 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 ZNF793Q6ZN11 406 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 CAMKMTQ7Z624 323 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 UBE3DQ7Z6J8 389 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 ACOT4Q8N9L9 421 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 FAM222BQ8WU58 562 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 ANKRD9Q96BM1 317 aaPredicted RBP17.21■□□□□ 0.35
NME3-204ENST00000563498 MBD6Q96DN6 1003 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 SPACA9Q96E40 222 aaPredicted RBP17.21■□□□□ 0.35
NME3-204ENST00000563498 LRRC46Q96FV0 321 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 SENP5Q96HI0 755 aaPredicted RBP17.21■□□□□ 0.35
NME3-204ENST00000563498 CAPZA3Q96KX2 299 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 MAPKAP1Q9BPZ7 522 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 MCMBPQ9BTE3 642 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 DDX47Q9H0S4 455 aaKnown RBP17.21■□□□□ 0.35
NME3-204ENST00000563498 RHOJQ9H4E5 214 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 MOCS1Q9NZB8 636 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 WWOXQ9NZC7 414 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 ABCA4P78363 2273 aa17.21■□□□□ 0.34
NME3-204ENST00000563498 ACANP16112 2415 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 ABCA2Q9BZC7 2435 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 A6NNC1 897 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 DVL2O14641 736 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 DYRK3O43781 588 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 STK16O75716 305 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 WISP3O95389 354 aaPredicted RBP17.2■□□□□ 0.34
NME3-204ENST00000563498 CD22P20273 847 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 HIST1H1TP22492 207 aaPredicted RBP17.2■□□□□ 0.34
NME3-204ENST00000563498 UQCRC1P31930 480 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 STT3AP46977 705 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 KCNJ2P63252 427 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 TBCCQ15814 346 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 PDK4Q16654 411 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 HIST2H2ACQ16777 129 aaPredicted RBP17.2■□□□□ 0.34
NME3-204ENST00000563498 FBXL19-AS1Q494R0 122 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 FLYWCH1Q4VC44 716 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 TMEM35AQ53FP2 167 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 HIST2H2AA3Q6FI13 130 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 SULT1C3Q6IMI6 304 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 LYPD8Q6UX82 237 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 SEM1Q6ZVN7 128 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 CDC20BQ86Y33 519 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 C9orf40Q8IXQ3 194 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 ULK2Q8IYT8 1036 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 GOT1L1Q8NHS2 421 aaPredicted RBP17.2■□□□□ 0.34
NME3-204ENST00000563498 NEIL3Q8TAT5 605 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 PWWP2AQ96N64 755 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 RUNDC3BQ96NL0 473 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 SH3GL2Q99962 352 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 MS4A8Q9BY19 250 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 NSMCE4AQ9NXX6 385 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 CNIH4Q9P003 139 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 FOXD3Q9UJU5 478 aaPredicted RBP17.2■□□□□ 0.34
NME3-204ENST00000563498 AKAP6Q13023 2319 aa17.2■□□□□ 0.34
NME3-204ENST00000563498 ARHGAP21Q5T5U3 1957 aa17.19■□□□□ 0.34
NME3-204ENST00000563498 LRRC3CA6NJW4 275 aa17.19■□□□□ 0.34
NME3-204ENST00000563498 RFPL3SP0C7P2 107 aa17.19■□□□□ 0.34
NME3-204ENST00000563498 CASP2P42575 452 aa17.19■□□□□ 0.34
NME3-204ENST00000563498 ASCL1P50553 236 aa17.19■□□□□ 0.34
NME3-204ENST00000563498 ARL4CP56559 192 aa17.19■□□□□ 0.34
NME3-204ENST00000563498 ID2Q02363 134 aa17.19■□□□□ 0.34
NME3-204ENST00000563498 SNTB1Q13884 538 aaKnown RBP17.19■□□□□ 0.34
NME3-204ENST00000563498 E2F2Q14209 437 aa17.19■□□□□ 0.34
NME3-204ENST00000563498 DAZAP2Q15038 168 aaPredicted RBP17.19■□□□□ 0.34
NME3-204ENST00000563498 SYDE1Q6ZW31 735 aaPredicted RBP17.19■□□□□ 0.34
NME3-204ENST00000563498 GPSM1Q86YR5 675 aa17.19■□□□□ 0.34
NME3-204ENST00000563498 SNX31Q8N9S9 440 aa17.19■□□□□ 0.34
NME3-204ENST00000563498 RELL2Q8NC24 303 aaPredicted RBP17.19■□□□□ 0.34
NME3-204ENST00000563498 BBOF1Q8ND07 529 aa17.19■□□□□ 0.34
NME3-204ENST00000563498 ZNF473Q8WTR7 871 aaKnown RBP17.19■□□□□ 0.34
NME3-204ENST00000563498 RNASE6Q93091 150 aaKnown RBP17.19■□□□□ 0.34
NME3-204ENST00000563498 FBXL20Q96IG2 436 aa17.19■□□□□ 0.34
NME3-204ENST00000563498 ART5Q96L15 291 aa17.19■□□□□ 0.34
NME3-204ENST00000563498 DGAT2Q96PD7 388 aa17.19■□□□□ 0.34
NME3-204ENST00000563498 PROK2Q9HC23 129 aa17.19■□□□□ 0.34
NME3-204ENST00000563498 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.19■□□□□ 0.342e-11■■■■■ 42.6
NME3-204ENST00000563498 PLEKHA6Q9Y2H5 1048 aa17.19■□□□□ 0.34
NME3-204ENST00000563498 RPH3AQ9Y2J0 694 aaPredicted RBP17.19■□□□□ 0.34
NME3-204ENST00000563498 HRNRQ86YZ3 2850 aaPredicted RBP17.18■□□□□ 0.34
NME3-204ENST00000563498 AHRRA9YTQ3 701 aa17.18■□□□□ 0.34
NME3-204ENST00000563498 FGF17O60258 216 aa17.18■□□□□ 0.34
NME3-204ENST00000563498 EPORP19235 508 aa17.18■□□□□ 0.34
NME3-204ENST00000563498 CPN2P22792 545 aa17.18■□□□□ 0.34
NME3-204ENST00000563498 SERPINB1P30740 379 aa17.18■□□□□ 0.34
NME3-204ENST00000563498 CEACAM8P31997 349 aaPredicted RBP17.18■□□□□ 0.34
NME3-204ENST00000563498 MSH2P43246 934 aa17.18■□□□□ 0.34
NME3-204ENST00000563498 HSPA7P48741 367 aa17.18■□□□□ 0.34
NME3-204ENST00000563498 DGKQP52824 942 aa17.18■□□□□ 0.34
NME3-204ENST00000563498 SLC12A2P55011 1212 aa17.18■□□□□ 0.34
NME3-204ENST00000563498 POU4F1Q01851 419 aa17.18■□□□□ 0.34
NME3-204ENST00000563498 AP5B1Q2VPB7 878 aa17.18■□□□□ 0.34
NME3-204ENST00000563498 MMP21Q8N119 569 aa17.18■□□□□ 0.34
NME3-204ENST00000563498 PDPRQ8NCN5 879 aa17.18■□□□□ 0.34
NME3-204ENST00000563498 UBE2E3Q969T4 207 aa17.18■□□□□ 0.34
NME3-204ENST00000563498 RBM18Q96H35 190 aaKnown RBP17.18■□□□□ 0.34
NME3-204ENST00000563498 MS4A12Q9NXJ0 267 aa17.18■□□□□ 0.34
NME3-204ENST00000563498 ZNF629Q9UEG4 869 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms