RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 NRGNQ92686 78 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 SARAFQ96BY9 339 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 RBBP8Q99708 897 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 COPS7AQ9UBW8 275 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 ACAD8Q9UKU7 415 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 SNX24Q9Y343 169 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 L3MBTL1Q9Y468 752 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.72□□□□□ -0.05
SCFD1-224ENST00000557713 SPACA6W5XKT8 324 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 EML6Q6ZMW3 1958 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 CCDC188H7C350 402 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 HCN1O60741 890 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 NADKO95544 446 aaPredicted RBP14.71□□□□□ -0.05
SCFD1-224ENST00000557713 C1QAP02745 245 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 COX7A2P14406 83 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 ENDOUP21128 410 aaKnown RBP14.71□□□□□ -0.05
SCFD1-224ENST00000557713 CPN2P22792 545 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 MYBPHQ13203 477 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 BIKQ13323 160 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 ZKSCAN8Q15776 578 aaPredicted RBP14.71□□□□□ -0.05
SCFD1-224ENST00000557713 C1orf185Q5T7R7 199 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 DEPDC1Q5TB30 811 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 SLC22A10Q63ZE4 541 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 OR4C11Q6IEV9 310 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 CHSY3Q70JA7 882 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 CYS1Q717R9 158 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 LRRC70Q7Z2Q7 622 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 C9orf40Q8IXQ3 194 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 BBOF1Q8ND07 529 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 MYRIPQ8NFW9 859 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 OR7G3Q8NG95 312 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 PAQR8Q8TEZ7 354 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 PYROXD1Q8WU10 500 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 UBE2E3Q969T4 207 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 PPWD1Q96BP3 646 aaKnown RBP14.71□□□□□ -0.05
SCFD1-224ENST00000557713 CPNE1Q99829 537 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 CNPPD1Q9BV87 410 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 PHACTR1Q9C0D0 580 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 LDAHQ9H6V9 325 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 PROK2Q9HC23 129 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 SPRR3Q9UBC9 169 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 RNF112Q9ULX5 631 aa14.71□□□□□ -0.05
SCFD1-224ENST00000557713 TRGV5A0A0B4J1U4 118 aa14.7□□□□□ -0.06
SCFD1-224ENST00000557713 HRKO00198 91 aa14.7□□□□□ -0.06
SCFD1-224ENST00000557713 SAP18O00422 153 aaKnown RBP14.7□□□□□ -0.06
SCFD1-224ENST00000557713 SH3BGRLO75368 114 aa14.7□□□□□ -0.06
SCFD1-224ENST00000557713 RFPL3SP0C7P2 107 aa14.7□□□□□ -0.06
SCFD1-224ENST00000557713 GMPRP36959 345 aa14.7□□□□□ -0.06
SCFD1-224ENST00000557713 IST1P53990 364 aa14.7□□□□□ -0.06
SCFD1-224ENST00000557713 SLAMF1Q13291 335 aa14.7□□□□□ -0.06
SCFD1-224ENST00000557713 WLSQ5T9L3 541 aa14.7□□□□□ -0.06
SCFD1-224ENST00000557713 KHDRBS2Q5VWX1 349 aaKnown RBP14.7□□□□□ -0.06
SCFD1-224ENST00000557713 MED27Q6P2C8 311 aa14.7□□□□□ -0.06
SCFD1-224ENST00000557713 ISCA2Q86U28 154 aa14.7□□□□□ -0.06
SCFD1-224ENST00000557713 SLC15A4Q8N697 577 aa14.7□□□□□ -0.06
SCFD1-224ENST00000557713 CDKL2Q92772 493 aa14.7□□□□□ -0.06
SCFD1-224ENST00000557713 CMTM7Q96FZ5 175 aa14.7□□□□□ -0.06
SCFD1-224ENST00000557713 RBM18Q96H35 190 aaKnown RBP14.7□□□□□ -0.06
SCFD1-224ENST00000557713 DGAT2Q96PD7 388 aa14.7□□□□□ -0.06
SCFD1-224ENST00000557713 SORBS1Q9BX66 1292 aaKnown RBP14.7□□□□□ -0.06
SCFD1-224ENST00000557713 KCNF1Q9H3M0 494 aa14.7□□□□□ -0.06
SCFD1-224ENST00000557713 RPF2Q9H7B2 306 aaKnown RBP14.7□□□□□ -0.06
SCFD1-224ENST00000557713 TXNDC16Q9P2K2 825 aa14.7□□□□□ -0.06
SCFD1-224ENST00000557713 INTS1Q8N201 2190 aaKnown RBP14.7□□□□□ -0.06
SCFD1-224ENST00000557713 TCRBV9S1A1TA0A576 114 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 FAM159BA6NKW6 160 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 CTAG2O75638 210 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 ZWINTO95229 277 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 S100BP04271 92 aaPredicted RBP14.69□□□□□ -0.06
SCFD1-224ENST00000557713 PCNAP12004 261 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 GABRA1P14867 456 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 SERPINB1P30740 379 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 GP5P40197 560 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 SSR2P43308 183 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 RAB10P61026 200 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 FOLH1Q04609 750 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 DLG1Q12959 904 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 SLC25A35Q3KQZ1 300 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 KRTAP21-3Q3LHN1 58 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 RIPPLY2Q5TAB7 128 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 ARSKQ6UWY0 536 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 LRRC25Q8N386 305 aaPredicted RBP14.69□□□□□ -0.06
SCFD1-224ENST00000557713 RNF175Q8N4F7 328 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 STAG3L4Q8TBR4 150 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 SLC22A8Q8TCC7 542 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 TANKQ92844 425 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 SPACA9Q96E40 222 aaPredicted RBP14.69□□□□□ -0.06
SCFD1-224ENST00000557713 FBXL20Q96IG2 436 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 KRT12Q99456 494 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 TMUB1Q9BVT8 246 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 CXXC4Q9H2H0 198 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 OR51B5Q9H339 312 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 ZNF703Q9H7S9 590 aaPredicted RBP14.69□□□□□ -0.06
SCFD1-224ENST00000557713 ZFP64Q9NPA5 681 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 SAYSD1Q9NPB0 183 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 ACKR4Q9NPB9 350 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 MS4A12Q9NXJ0 267 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 ALKBH4Q9NXW9 302 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 PCDHGB3Q9Y5G1 929 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 SAR1BQ9Y6B6 198 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms