RNA–Protein interactions for RNA: ENST00000557370.2

MTHFD1-215, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-215ENST00000557370 LIMS1P48059 325 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 MASP1P48740 699 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 RGS6P49758 472 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 EIF2B2P49770 351 aaKnown RBP6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 PCBP3P57721 371 aaKnown RBP6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 DSTNP60981 165 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 VBP1P61758 197 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 RAE1P78406 368 aaKnown RBP6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 SPIBQ01892 262 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 SEMG2Q02383 582 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 EEF1A2Q05639 463 aaKnown RBP6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 C2orf80Q0P641 193 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 ILKQ13418 452 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 PTPRRQ15256 657 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 CCDC92Q53HC0 331 aaPredicted RBP6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 TMEM201Q5SNT2 666 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 SLC25A30Q5SVS4 291 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 PRAMEF8Q5VWM4 474 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 PRAMEF7Q5VXH5 474 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 NXPE4Q6UWF7 544 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 NCCRP1Q6ZVX7 275 aaPredicted RBP6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 GET4Q7L5D6 327 aaPredicted RBP6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 ZNF551Q7Z340 670 aaPredicted RBP6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 VTCN1Q7Z7D3 282 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 FAM124AQ86V42 546 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 SYTL1Q8IYJ3 562 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 CMTM8Q8IZV2 173 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 NAGSQ8N159 534 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 TMIEQ8NEW7 156 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 TTLQ8NG68 377 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 C16orf78Q8WTQ4 265 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 KLHL6Q8WZ60 621 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 GGHQ92820 318 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 RAB7BQ96AH8 199 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 MOAP1Q96BY2 351 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 PYCR2Q96C36 320 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 AP2M1Q96CW1 435 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 NEURL3Q96EH8 262 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 MED8Q96G25 268 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 PDXPQ96GD0 296 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 CEP19Q96LK0 163 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 TRNT1Q96Q11 434 aaKnown RBP6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 SLC22A12Q96S37 553 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 MTERF1Q99551 399 aaKnown RBP6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 PKP4Q99569 1192 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 RIOK2Q9BVS4 552 aaKnown RBP6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 TEX12Q9BXU0 123 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 EBPLQ9BY08 206 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 ZBP1Q9H171 429 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 ARRDC1-AS1Q9H2J1 176 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 RHBGQ9H310 441 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 TRIM45Q9H8W5 580 aaPredicted RBP6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 TRIM39Q9HCM9 518 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 ISYNA1Q9NPH2 558 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 DMRT3Q9NQL9 472 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 SPHK2Q9NRA0 654 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 ACSS1Q9NUB1 689 aaPredicted RBP6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 TDP1Q9NUW8 608 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 ZNF229Q9UJW7 825 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 KCND3Q9UK17 655 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 UTS2RQ9UKP6 389 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 TMPRSS11EQ9UL52 423 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 STUB1Q9UNE7 303 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 ITM2BQ9Y287 266 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 PCDHGA3Q9Y5H0 932 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 IRAK3Q9Y616 596 aa6.94□□□□□ -1.3
MTHFD1-215ENST00000557370 BPTFQ12830 3046 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 MYO18BQ8IUG5 2567 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 DSPP15924 2871 aaKnown RBP6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 PIPSLA2A3N6 862 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 HAT1O14929 419 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 NPC1O15118 1278 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 AXIN1O15169 862 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 AQP9O43315 295 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 TGM5O43548 720 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 TSPAN6O43657 245 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 PRAMEF4O60810 478 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 ATP6V1G1O75348 118 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 SLC16A8O95907 504 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 C8AP07357 584 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 TRAPPC2P0DI81 140 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 TRAPPC2BP0DI82 140 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 CYP4B1P13584 511 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 OSMP13725 252 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 DRD2P14416 443 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 NPPBP16860 134 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 GABRB1P18505 474 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 CD22P20273 847 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 ENDOUP21128 410 aaKnown RBP6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 S100A1P23297 94 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 CHMP24386 653 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 PSMA1P25786 263 aaKnown RBP6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 GKP32189 559 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 CSTF2P33240 577 aaKnown RBP eCLIP6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 CA5AP35218 305 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 MAP2K4P45985 399 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 CRISP1P54107 249 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 UGT2B15P54855 530 aa6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 RPS13P62277 151 aaKnown RBP6.93□□□□□ -1.3
MTHFD1-215ENST00000557370 RUNX1T1Q06455 604 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms