RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 DPEP3Q9H4B8 488 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 MRPL47Q9HD33 250 aaKnown RBP3.89□□□□□ -1.79
TRAV15-201ENST00000556680 TCF7L2Q9NQB0 619 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 RGS18Q9NS28 235 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 TSPAN16Q9UKR8 245 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 SLC7A7Q9UM01 511 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 BARX2Q9UMQ3 279 aaPredicted RBP3.89□□□□□ -1.79
TRAV15-201ENST00000556680 SNX7Q9UNH6 387 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 PRG3Q9Y2Y8 225 aaPredicted RBP3.89□□□□□ -1.79
TRAV15-201ENST00000556680 DOCK6Q96HP0 2047 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 MYOFQ9NZM1 2061 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 A0A1W2PPI3 338 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 OR6C76A6NM76 312 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 BTNL10A8MVZ5 291 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 PIRO00625 290 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 GAPDHSO14556 408 aaPredicted RBP3.88□□□□□ -1.79
TRAV15-201ENST00000556680 HCRTO43612 131 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 B3GAT3O94766 335 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 ACSL3O95573 720 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 LSM8O95777 96 aaKnown RBP3.88□□□□□ -1.79
TRAV15-201ENST00000556680 IGHV4-39P01824 125 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 SAGP10523 405 aaPredicted RBP3.88□□□□□ -1.79
TRAV15-201ENST00000556680 TCP1P17987 556 aaKnown RBP3.88□□□□□ -1.79
TRAV15-201ENST00000556680 MPZP25189 248 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 PSMA2P25787 234 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 CCKARP32238 428 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 CTNNA1P35221 906 aaKnown RBP3.88□□□□□ -1.79
TRAV15-201ENST00000556680 LHX1P48742 406 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 THOP1P52888 689 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 PDX1P52945 283 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 CDH11P55287 796 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 ARPP19P56211 112 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 SLC8A3P57103 927 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 CX3CL1P78423 397 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 SCN1BQ07699 218 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 INCA1Q0VD86 236 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 TUBB2AQ13885 445 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 SMC1AQ14683 1233 aaKnown RBP3.88□□□□□ -1.79
TRAV15-201ENST00000556680 KIR2DS3Q14952 304 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 ZBTB6Q15916 424 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 CDO1Q16878 200 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 WHAMMP3Q1A5X7 153 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 LRRC26Q2I0M4 334 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 SYT14P1Q58G82 188 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 TCTE1Q5JU00 501 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 C6orf136Q5SQH8 315 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 ALKAL1Q6UXT8 129 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 LINGO4Q6UY18 593 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 NUP54Q7Z3B4 507 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 SIX6OS1Q8N1H7 587 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 TMEM86AQ8N2M4 240 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 PDCL2Q8N4E4 241 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 C12orf29Q8N999 325 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 OR13J1Q8NGT2 312 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 KCNE4Q8WWG9 221 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 VMP1Q96GC9 406 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 MS4A14Q96JA4 679 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 CCDC114Q96M63 670 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 C17orf77Q96MU5 243 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 MCEEQ96PE7 176 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 MYADMQ96S97 322 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 RTP3Q9BQQ7 232 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 SYT15Q9BQS2 421 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 TUBB2BQ9BVA1 445 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 MIS12Q9H081 205 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 FN3KQ9H479 309 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 CDH20Q9HBT6 801 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 XAB2Q9HCS7 855 aaKnown RBP3.88□□□□□ -1.79
TRAV15-201ENST00000556680 PARVAQ9NVD7 372 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 TMEM161AQ9NX61 479 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 CHCHD3Q9NX63 227 aaKnown RBP3.88□□□□□ -1.79
TRAV15-201ENST00000556680 DDX43Q9NXZ2 648 aaKnown RBP3.88□□□□□ -1.79
TRAV15-201ENST00000556680 UVRAGQ9P2Y5 699 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 SNX12Q9UMY4 172 aa3.88□□□□□ -1.79
TRAV15-201ENST00000556680 KIAA0100Q14667 2235 aaKnown RBP3.88□□□□□ -1.79
TRAV15-201ENST00000556680 SYNJ2BP-COX16A0A087WUM0 186 aa3.87□□□□□ -1.79
TRAV15-201ENST00000556680 MIF4GDA9UHW6 222 aaKnown RBP3.87□□□□□ -1.79
TRAV15-201ENST00000556680 E9PI62 339 aa3.87□□□□□ -1.79
TRAV15-201ENST00000556680 CCDC188H7C350 402 aa3.87□□□□□ -1.79
TRAV15-201ENST00000556680 PGRMC1O00264 195 aaKnown RBP3.87□□□□□ -1.79
TRAV15-201ENST00000556680 O00370 1275 aa3.87□□□□□ -1.79
TRAV15-201ENST00000556680 CLDN5O00501 218 aa3.87□□□□□ -1.79
TRAV15-201ENST00000556680 TRAPPC3O43617 180 aa3.87□□□□□ -1.79
TRAV15-201ENST00000556680 GRAP2O75791 330 aa3.87□□□□□ -1.79
TRAV15-201ENST00000556680 DDHD2O94830 711 aa3.87□□□□□ -1.79
TRAV15-201ENST00000556680 WDPCPO95876 746 aa3.87□□□□□ -1.79
TRAV15-201ENST00000556680 GBAP04062 536 aa3.87□□□□□ -1.79
TRAV15-201ENST00000556680 INHBAP08476 426 aa3.87□□□□□ -1.79
TRAV15-201ENST00000556680 RHOXF2BP0C7M4 288 aa3.87□□□□□ -1.79
TRAV15-201ENST00000556680 FAM200BP0CF97 657 aa3.87□□□□□ -1.79
TRAV15-201ENST00000556680 KRT3P12035 628 aa3.87□□□□□ -1.79
TRAV15-201ENST00000556680 CD22P20273 847 aa3.87□□□□□ -1.79
TRAV15-201ENST00000556680 MSH3P20585 1137 aa3.87□□□□□ -1.79
TRAV15-201ENST00000556680 WARSP23381 471 aaKnown RBP3.87□□□□□ -1.79
TRAV15-201ENST00000556680 JAK1P23458 1154 aa3.87□□□□□ -1.79
TRAV15-201ENST00000556680 LMO2P25791 158 aa3.87□□□□□ -1.79
TRAV15-201ENST00000556680 TLX1P31314 330 aaPredicted RBP3.87□□□□□ -1.79
TRAV15-201ENST00000556680 RPL9P32969 192 aaKnown RBP3.87□□□□□ -1.79
TRAV15-201ENST00000556680 RFC2P35250 354 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms