RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 LPGAT1Q92604 370 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 MAGOHBQ96A72 148 aaKnown RBP3.96□□□□□ -1.78
CPSF2-204ENST00000555244 ZNF285Q96NJ3 590 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 SERPINB12Q96P63 405 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 TRAPPC9Q96Q05 1148 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 PANX3Q96QZ0 392 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 OR2A14Q96R47 310 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 OR6C1Q96RD1 312 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 SORBS1Q9BX66 1292 aaKnown RBP3.96□□□□□ -1.78
CPSF2-204ENST00000555244 TSSK1BQ9BXA7 367 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 SEMA4CQ9C0C4 833 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 SRMSQ9H3Y6 488 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 FAM96AQ9H5X1 160 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 XAB2Q9HCS7 855 aaKnown RBP3.96□□□□□ -1.78
CPSF2-204ENST00000555244 MLXIPLQ9NP71 852 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 SAYSD1Q9NPB0 183 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 LHX9Q9NQ69 397 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 IMP3Q9NV31 184 aaKnown RBP3.96□□□□□ -1.78
CPSF2-204ENST00000555244 INTS10Q9NVR2 710 aaKnown RBP3.96□□□□□ -1.78
CPSF2-204ENST00000555244 SMARCAL1Q9NZC9 954 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 MARCH4Q9P2E8 410 aaPredicted RBP3.96□□□□□ -1.78
CPSF2-204ENST00000555244 GRHPRQ9UBQ7 328 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 RNF14Q9UBS8 474 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 IL17BQ9UHF5 180 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 PCYOX1Q9UHG3 505 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 KCND3Q9UK17 655 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 RARRES3Q9UL19 164 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 PADI1Q9ULC6 663 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 PSMD13Q9UNM6 376 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 ICKQ9UPZ9 632 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 RPS6KL1Q9Y6S9 549 aa3.96□□□□□ -1.78
CPSF2-204ENST00000555244 USP9XQ93008 2570 aaPredicted RBP3.96□□□□□ -1.78
CPSF2-204ENST00000555244 OR51F1A6NGY5 319 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 H0YIZ8 118 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 GFYI3L273 518 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 OVOL3O00110 214 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 PGRMC1O00264 195 aaKnown RBP3.95□□□□□ -1.78
CPSF2-204ENST00000555244 RASGRF2O14827 1237 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 PFDN6O15212 129 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 TP73O15350 636 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 NKX2-8O15522 239 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 SPRY2O43597 315 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 KIF5CO60282 957 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 CEACAM4O75871 244 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 KIAA0754O94854 1291 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 TMEM63AO94886 807 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 VAPBO95292 243 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 KRT14P02533 472 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 RPN2P04844 631 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 APOA4P06727 396 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 CHRM5P08912 532 aaPredicted RBP3.95□□□□□ -1.78
CPSF2-204ENST00000555244 CD63P08962 238 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 HBQ1P09105 142 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 ST6GAL1P15907 406 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 POLR2CP19387 275 aaPredicted RBP3.95□□□□□ -1.78
CPSF2-204ENST00000555244 NMBRP28336 390 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 PTPN4P29074 926 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 PBLDP30039 288 aaPredicted RBP3.95□□□□□ -1.78
CPSF2-204ENST00000555244 PEBP1P30086 187 aaKnown RBP3.95□□□□□ -1.78
CPSF2-204ENST00000555244 PKLRP30613 574 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 CXCR5P32302 372 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 MAPK9P45984 424 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 LMAN1P49257 510 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 ARL4CP56559 192 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 PRAMEP78395 509 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 TXNL4AP83876 142 aaKnown RBP3.95□□□□□ -1.78
CPSF2-204ENST00000555244 FOXM1Q08050 763 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 CDC20Q12834 499 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 PRKAA1Q13131 559 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 FHL3Q13643 280 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 CBFBQ13951 182 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 ARHGAP19Q14CB8 494 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 TIGD6Q17RP2 521 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 ANKRD20A4Q4UJ75 823 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 C4orf46Q504U0 113 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 CTSL3PQ5NE16 218 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 RNASEH2BQ5TBB1 312 aaKnown RBP3.95□□□□□ -1.78
CPSF2-204ENST00000555244 ANKRD22Q5VYY1 191 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 CCDC144NLQ6NUI1 221 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 NEPROQ6NW34 567 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 IRGCQ6NXR0 463 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 DUS1LQ6P1R4 473 aaKnown RBP3.95□□□□□ -1.78
CPSF2-204ENST00000555244 CCDC137Q6PK04 289 aaKnown RBP3.95□□□□□ -1.78
CPSF2-204ENST00000555244 SPESP1Q6UW49 350 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 CYHR1Q6ZMK1 362 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 CYS1Q717R9 158 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 CENPUQ71F23 418 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 ZNF627Q7L945 461 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 SLC29A4Q7RTT9 530 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 GSTA5Q7RTV2 222 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 MRGPRGQ86SM5 289 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 SDCCAG8Q86SQ7 713 aaPredicted RBP3.95□□□□□ -1.78
CPSF2-204ENST00000555244 SYVN1Q86TM6 617 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 VASH2Q86V25 355 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 SLC44A2Q8IWA5 706 aaPredicted RBP3.95□□□□□ -1.78
CPSF2-204ENST00000555244 DCUN1D3Q8IWE4 304 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 CNTN4Q8IWV2 1026 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 DSELQ8IZU8 1212 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 SLC35F6Q8N357 371 aa3.95□□□□□ -1.78
CPSF2-204ENST00000555244 DNAJC22Q8N4W6 341 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms