RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 ICKQ9UPZ9 632 aa13.47□□□□□ -0.25
CALCOCO1-218ENST00000550804 KLHL20Q9Y2M5 609 aa13.47□□□□□ -0.25
CALCOCO1-218ENST00000550804 FAM32AQ9Y421 112 aaKnown RBP13.47□□□□□ -0.25
CALCOCO1-218ENST00000550804 KIAA1549LQ6ZVL6 1849 aa13.47□□□□□ -0.25
CALCOCO1-218ENST00000550804 ATG2BQ96BY7 2078 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 SH3BP5O60239 455 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 ERGP11308 486 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 ANXA8P13928 327 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 GABRB1P18505 474 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 GRK5P34947 590 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 RPL3P39023 403 aaKnown RBP13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 FEN1P39748 380 aaKnown RBP13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 LSM11P83369 360 aaKnown RBP eCLIP13.46□□□□□ -0.251e-9■■■□□ 16.7
CALCOCO1-218ENST00000550804 DOC2BQ14184 412 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 PERM1Q5SV97 790 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 REEP3Q6NUK4 255 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 WDR53Q7Z5U6 358 aaPredicted RBP13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 COMTD1Q86VU5 262 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 ARMC8Q8IUR7 673 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 DYNC2LI1Q8TCX1 351 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 PHF10Q8WUB8 498 aaKnown RBP13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 GEMIN6Q8WXD5 167 aaKnown RBP13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 PDXPQ96GD0 296 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 C12orf66Q96MD2 445 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 C17orf62Q9BQA9 187 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 SERHL2Q9H4I8 314 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 THSD1Q9NS62 852 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 MS4A12Q9NXJ0 267 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 AHSPQ9NZD4 102 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 ZNF232Q9UNY5 417 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 ZFR2Q9UPR6 939 aaKnown RBP13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 ENPP4Q9Y6X5 453 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 NUMA1Q14980 2115 aa13.46□□□□□ -0.25
CALCOCO1-218ENST00000550804 A0A1W2PS29 197 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 CLCA1A8K7I4 914 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 HMGN4O00479 90 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 CAPN5O15484 640 aaPredicted RBP13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 TPST2O60704 377 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 SULT1C4O75897 302 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 HNRNPCP07910 306 aaKnown RBP eCLIP13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 EIF2DP41214 584 aaKnown RBP13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 CTSKP43235 329 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 PCBP4P57723 403 aaKnown RBP13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 RPA4Q13156 261 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 TP53BP2Q13625 1128 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 SEC23BQ15437 767 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 SYPL1Q16563 259 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 SAXO2Q658L1 398 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 ZNF605Q86T29 641 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 LACC1Q8IV20 430 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 CACTIN-AS1Q8N1I8 211 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 HDDC3Q8N4P3 179 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 VANGL1Q8TAA9 524 aaPredicted RBP13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 SYNPO2LQ9H987 977 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 NMNAT1Q9HAN9 279 aaPredicted RBP13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 MOSPD1Q9UJG1 213 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 ERGIC3Q9Y282 383 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 HCN4Q9Y3Q4 1203 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 STON1Q9Y6Q2 735 aa13.46□□□□□ -0.26
CALCOCO1-218ENST00000550804 F5P12259 2224 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 C4orf51C9J302 202 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 SLC22A1O15245 554 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 PDPK1O15530 556 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 SLC35G4P0C7Q5 338 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 OCM2P0CE71 109 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 OCMP0CE72 109 aaPredicted RBP13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 ITGA2P17301 1181 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 MAT2AP31153 395 aaKnown RBP13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 CCR3P51677 355 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 HMGA2P52926 109 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 SEC13P55735 322 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 CSNK1G2P78368 415 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 ST3GAL4Q11206 333 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 IRF4Q15306 451 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 CST6Q15828 149 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 SPDYE7PQ495Y7 208 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 TCTN3Q6NUS6 607 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 ZNF793Q6ZN11 406 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 IKBIPQ70UQ0 350 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 PAGE2Q7Z2X7 111 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 DSG4Q86SJ6 1040 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 SVOPQ8N4V2 548 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 TP53I13Q8NBR0 393 aaPredicted RBP13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 APOBEC4Q8WW27 367 aaKnown RBP13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 IPCEF1Q8WWN9 437 aaPredicted RBP13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 SMPDL3AQ92484 453 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 NEURL3Q96EH8 262 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 COX4I2Q96KJ9 171 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 YIPF4Q9BSR8 244 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 KCNK12Q9HB15 430 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 CCNB1IP1Q9NPC3 277 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 FZD3Q9NPG1 666 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 NECTIN3Q9NQS3 549 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 DNAAF2Q9NVR5 837 aaKnown RBP13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 ANGPT4Q9Y264 503 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 TRPM6Q9BX84 2022 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 A0A0C4DFX4 3053 aa13.45□□□□□ -0.26
CALCOCO1-218ENST00000550804 CCDC85CA6NKD9 419 aa13.44□□□□□ -0.26
CALCOCO1-218ENST00000550804 EFCAB9A8MZ26 197 aa13.44□□□□□ -0.26
CALCOCO1-218ENST00000550804 CLDN25C9JDP6 229 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms