RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 CACNA1CQ13936 2221 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 XKRYO14609 159 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 MYOGP15173 224 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 ITGB7P26010 798 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 RCVRNP35243 200 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 CSNK1DP48730 415 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 DMPKQ09013 629 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 ZNF267Q14586 743 aaPredicted RBP15.54■□□□□ 0.08
CUX1-213ENST00000549414 IDNKQ5T6J7 187 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 OR52N2Q8NGI0 321 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 KLHDC7BQ96G42 594 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 ZNF354BQ96LW1 612 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 LHPPQ9H008 270 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 DMRT3Q9NQL9 472 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 GPR83Q9NYM4 423 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 INTS6Q9UL03 887 aaKnown RBP15.54■□□□□ 0.08
CUX1-213ENST00000549414 TAPBPO15533 448 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 TFAP2AP05549 437 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 ZDHHC11BP0C7U3 371 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 CR2P20023 1033 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 MARCH9Q86YJ5 346 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 PIGKQ92643 395 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 ZNF583Q96ND8 569 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 ZBP1Q9H171 429 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 PCDHA9Q9Y5H5 950 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 TMEM150CB9EJG8 249 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 FRS3O43559 492 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 SSNA1O43805 119 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 CDRT1O95170 752 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 CDKN2CP42773 168 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 GRK6P43250 576 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 NCS1P62166 190 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 ZNF404Q494X3 552 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 ASPGQ86U10 573 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 MEX3DQ86XN8 651 aaKnown RBP15.54■□□□□ 0.08
CUX1-213ENST00000549414 DCP2Q8IU60 420 aaKnown RBP15.54■□□□□ 0.08
CUX1-213ENST00000549414 ZNF420Q8TAQ5 688 aaPredicted RBP15.54■□□□□ 0.08
CUX1-213ENST00000549414 ZNF675Q8TD23 568 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 FATE1Q969F0 183 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 MCOLN1Q9GZU1 580 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 TNFRSF10DQ9UBN6 386 aa15.54■□□□□ 0.08
CUX1-213ENST00000549414 IGLV3-27P01718 113 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 SCN1BQ07699 218 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 TUBA3CQ13748 450 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 MOGQ16653 247 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 ZNF829Q3KNS6 432 aaPredicted RBP15.53■□□□□ 0.08
CUX1-213ENST00000549414 OAFQ86UD1 273 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 GATSQ8NAP1 163 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 OR52E4Q8NGH9 312 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 SLC25A36Q96CQ1 311 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 POLE4Q9NR33 117 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 HSFX1Q9UBD0 423 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 MRTO4Q9UKD2 239 aaKnown RBP15.53■□□□□ 0.08
CUX1-213ENST00000549414 ABCG2Q9UNQ0 655 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 TMEM202A6NGA9 273 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 GSTM3P21266 225 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 CBLP22681 906 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 SLC9A3P48764 834 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 TXNL4AP83876 142 aaKnown RBP15.53■□□□□ 0.08
CUX1-213ENST00000549414 DEFB110Q30KQ9 67 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 PRPF38BQ5VTL8 546 aaKnown RBP15.53■□□□□ 0.08
CUX1-213ENST00000549414 MAGIXQ9H6Y5 334 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 CUEDC1Q9NWM3 386 aaPredicted RBP15.53■□□□□ 0.08
CUX1-213ENST00000549414 MGAT4BQ9UQ53 548 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.53■□□□□ 0.08
CUX1-213ENST00000549414 H7C0S8 307 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 CACNG3O60359 315 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 HMGN1P05114 100 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 LCKP06239 509 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 CD1EP15812 388 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 C5AR1P21730 350 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 AK4P27144 223 aaPredicted RBP15.53■□□□□ 0.08
CUX1-213ENST00000549414 RAB25P57735 213 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 TMEM31Q5JXX7 168 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 RAB43Q86YS6 212 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.53■□□□□ 0.08
CUX1-213ENST00000549414 OR5D16Q8NGK9 328 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 OR51A7Q8NH64 312 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 ECHDC3Q96DC8 303 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 DGAT2Q96PD7 388 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 CXXC1Q9P0U4 656 aaPredicted RBP15.53■□□□□ 0.08
CUX1-213ENST00000549414 M0R3H8 397 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 PCDHGA12O60330 932 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 GPR37L1O60883 481 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 C1orf105O95561 183 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 IL12BP29460 328 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 MLLT3P42568 568 aaPredicted RBP15.53■□□□□ 0.08
CUX1-213ENST00000549414 PIN1Q13526 163 aaPredicted RBP15.53■□□□□ 0.08
CUX1-213ENST00000549414 FAM78AQ5JUQ0 283 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 CDKL4Q5MAI5 379 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 OR4C11Q6IEV9 310 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 FIGNL1Q6PIW4 674 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 UNC5DQ6UXZ4 953 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 NRROSQ86YC3 692 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 DMRTB1Q96MA1 342 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 ANKRA2Q9H9E1 313 aa15.53■□□□□ 0.08
CUX1-213ENST00000549414 CEP250Q9BV73 2442 aa15.52■□□□□ 0.08
CUX1-213ENST00000549414 KHNYNO15037 678 aaKnown RBP15.52■□□□□ 0.08
CUX1-213ENST00000549414 PEX11BO96011 259 aa15.52■□□□□ 0.08
CUX1-213ENST00000549414 RORCP51449 518 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms