RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 PCDH17O14917 1159 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 GALR3O60755 368 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-206ENST00000544964 ZG16O60844 167 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 RDH16O75452 317 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 SKAP2O75563 359 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-206ENST00000544964 NSA2O95478 260 aaKnown RBP11.7□□□□□ -0.54
ACTN1-206ENST00000544964 EMP2P54851 167 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 ARG2P78540 354 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 HMGCS1Q01581 520 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 CSTF3Q12996 717 aaKnown RBP11.7□□□□□ -0.54
ACTN1-206ENST00000544964 CUL3Q13618 768 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 HERC3Q15034 1050 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 INAQ16352 499 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 TMEM35AQ53FP2 167 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 C10orf62Q5T681 223 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-206ENST00000544964 FAAH2Q6GMR7 532 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 TRIM40Q6P9F5 258 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 TMEM205Q6UW68 189 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 DDIASQ8IXT1 998 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 OR5T3Q8NGG3 340 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 OR1N1Q8NGS0 311 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 FAM76AQ8TAV0 307 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 TWIST2Q8WVJ9 160 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 NR4A3Q92570 626 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 RGMAQ96B86 450 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 QRFPRQ96P65 431 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 YIPF2Q9BWQ6 316 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 MRPL1Q9BYD6 325 aaKnown RBP11.7□□□□□ -0.54
ACTN1-206ENST00000544964 ACPTQ9BZG2 426 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 TUBB1Q9H4B7 451 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 COPS7BQ9H9Q2 264 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-206ENST00000544964 BRF2Q9HAW0 419 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 MKKSQ9NPJ1 570 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-206ENST00000544964 RIC8BQ9NVN3 520 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 THAP1Q9NVV9 213 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 PSD3Q9NYI0 1048 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 PLA2G3Q9NZ20 509 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 HCN3Q9P1Z3 774 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 CDC14AQ9UNH5 594 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-206ENST00000544964 DCHS2Q6V1P9 2916 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 NCOA6Q14686 2063 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-206ENST00000544964 CCDC168Q8NDH2 2452 aa11.7□□□□□ -0.54
ACTN1-206ENST00000544964 PLPP1O14494 284 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 PIP5K1BO14986 540 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 JRKO75564 520 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 BMP10O95393 424 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 CHEK2O96017 543 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 F10P00742 488 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 LINC00032P0C843 101 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 KITP10721 976 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 ITGAMP11215 1152 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 HSD3B1P14060 373 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 HSD3B2P26439 372 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 CERS1P27544 350 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 SSR2P43308 183 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 RPL14P50914 215 aaKnown RBP11.69□□□□□ -0.54
ACTN1-206ENST00000544964 KCNK10P57789 538 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 OCRLQ01968 901 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 GUCY1A3Q02108 690 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 BTKQ06187 659 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 TGM3Q08188 693 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 IMPG1Q17R60 797 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 AP5B1Q2VPB7 878 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 OR4C11Q6IEV9 310 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 ZNF793Q6ZN11 406 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 RIPOR1Q6ZS17 1223 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 SRFBP1Q8NEF9 429 aaKnown RBP11.69□□□□□ -0.54
ACTN1-206ENST00000544964 HAS2Q92819 552 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 PPP1R36Q96LQ0 422 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 MAGEB18Q96M61 343 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 CENPKQ9BS16 269 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 TBCDQ9BTW9 1192 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 RNF32Q9H0A6 362 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 ZNF700Q9H0M5 742 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 SLCO1B3Q9NPD5 702 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 PRDM7Q9NQW5 492 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 VPS29Q9UBQ0 182 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 MARCOQ9UEW3 520 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-206ENST00000544964 HAO1Q9UJM8 370 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 PPT2Q9UMR5 302 aa11.69□□□□□ -0.54
ACTN1-206ENST00000544964 PDZD2O15018 2839 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 ADGRG4Q8IZF6 3080 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 TRAV17A0A0B4J275 112 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 SERTM1A2A2V5 107 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 DYTNA2CJ06 578 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 H0YIG0 161 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 SLC28A1O00337 649 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 CHST10O43529 356 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 EEDO75530 441 aaKnown RBP11.68□□□□□ -0.54
ACTN1-206ENST00000544964 SNUPNO95149 360 aaKnown RBP11.68□□□□□ -0.54
ACTN1-206ENST00000544964 WDPCPO95876 746 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 GBAP04062 536 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 JUNP05412 331 aaKnown RBP11.68□□□□□ -0.54
ACTN1-206ENST00000544964 HEXBP07686 556 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 PRF1P14222 555 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 ATP5A1P25705 553 aaKnown RBP11.68□□□□□ -0.54
ACTN1-206ENST00000544964 BSGP35613 385 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 MTTPP55157 894 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 PER3P56645 1201 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms