RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 IFNAR2P48551 515 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 GEMP55040 296 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 KRTAP10-7P60409 375 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-217ENST00000541578 IRX3P78415 501 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-217ENST00000541578 ITGA9Q13797 1035 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 BTG3Q14201 252 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-217ENST00000541578 ZRSR1Q15695 479 aaKnown RBP3.8□□□□□ -1.8
SNHG1-217ENST00000541578 TPD52L1Q16890 204 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-217ENST00000541578 GFI1BQ5VTD9 330 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 CST9Q5W186 159 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 ARSKQ6UWY0 536 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 USP43Q70EL4 1123 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 ANKRD33Q7Z3H0 272 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 ZNF329Q86UD4 541 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 ELMOD1Q8N336 334 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 NIPA2Q8N8Q9 360 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 SIDT2Q8NBJ9 832 aaKnown RBP3.8□□□□□ -1.8
SNHG1-217ENST00000541578 ZNF540Q8NDQ6 660 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 GRHL3Q8TE85 626 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 N4BP2L2Q92802 583 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-217ENST00000541578 SLC47A1Q96FL8 570 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 RBM41Q96IZ5 413 aaKnown RBP3.8□□□□□ -1.8
SNHG1-217ENST00000541578 CDCA3Q99618 268 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-217ENST00000541578 ZNF577Q9BSK1 485 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 OR2B2Q9GZK3 357 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 BICC1Q9H694 974 aaKnown RBP3.8□□□□□ -1.8
SNHG1-217ENST00000541578 PELI2Q9HAT8 420 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 KCNMB3Q9NPA1 279 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 ACOXLQ9NUZ1 547 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 MDFICQ9P1T7 246 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 PLEKHA6Q9Y2H5 1048 aa3.8□□□□□ -1.8
SNHG1-217ENST00000541578 ARFGEF2Q9Y6D5 1785 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 A0A1W2PP64 1363 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 SYNJ2BP-COX16A0A087WUM0 186 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 A0A1W2PS18 150 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 A8MVM7 634 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 C16orf97H3BN30 126 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 TULP2O00295 520 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 GRID2O43424 1007 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 IDH1O75874 414 aaKnown RBP3.79□□□□□ -1.8
SNHG1-217ENST00000541578 DIRAS3O95661 229 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 CXCL14O95715 111 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 AK1P00568 194 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 ATP1A1P05023 1023 aaKnown RBP3.79□□□□□ -1.8
SNHG1-217ENST00000541578 PROS1P07225 676 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 NUDT17P0C025 328 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 KRT3P12035 628 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 ANPEPP15144 967 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 CTNNA2P26232 953 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 SRD5A2P31213 254 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 ACAA2P42765 397 aaKnown RBP3.79□□□□□ -1.8
SNHG1-217ENST00000541578 MAGEA4P43358 317 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 BRWD1-AS2P59051 145 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 GCNT1Q02742 428 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 NME3Q13232 169 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 SQLEQ14534 574 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 HERC3Q15034 1050 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 TRADDQ15628 312 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 CEBPEQ15744 281 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 STX1AQ16623 288 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 CMPK2Q5EBM0 449 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 LDLRAP1Q5SW96 308 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 LYPLAL1Q5VWZ2 237 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 SNRNP48Q6IEG0 339 aaKnown RBP3.79□□□□□ -1.8
SNHG1-217ENST00000541578 ZNF770Q6IQ21 691 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-217ENST00000541578 SLC27A4Q6P1M0 643 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 ZCCHC12Q6PEW1 402 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 CASC1Q6TDU7 716 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 ZNF852Q6ZMS4 543 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 SLC24A5Q71RS6 500 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 TUBA1AQ71U36 451 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 MARK2Q7KZI7 788 aaKnown RBP3.79□□□□□ -1.8
SNHG1-217ENST00000541578 SYVN1Q86TM6 617 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 ISCA2Q86U28 154 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 TBC1D21Q8IYX1 336 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 NAGSQ8N159 534 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 MAB21L3Q8N8X9 362 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 LRTM2Q8N967 370 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 ZNF383Q8NA42 475 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 CNBD1Q8NA66 436 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 SLC37A3Q8NCC5 494 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 DENND6BQ8NEG7 585 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 DMBX1Q8NFW5 382 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 KBTBD8Q8NFY9 601 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 FBXO30Q8TB52 745 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 LNX1Q8TBB1 728 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-217ENST00000541578 UBTD2Q8WUN7 234 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 SELENOMQ8WWX9 145 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 PIK3R3Q92569 461 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 ESAMQ96AP7 390 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 ZNF274Q96GC6 653 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-217ENST00000541578 C4orf45Q96LM5 186 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 ASCL2Q99929 193 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 TUBA1CQ9BQE3 449 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 TPPP3Q9BW30 176 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 FTHL17Q9BXU8 183 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 CPVLQ9H3G5 476 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 TFB2MQ9H5Q4 396 aaKnown RBP3.79□□□□□ -1.8
SNHG1-217ENST00000541578 RAVER2Q9HCJ3 691 aaKnown RBP3.79□□□□□ -1.8
SNHG1-217ENST00000541578 FARSBQ9NSD9 589 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms