RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 VEPH1Q14D04 833 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 LARS2Q15031 903 aaKnown RBP13.39□□□□□ -0.27
CLPB-209ENST00000538039 SHFQ7M4L6 423 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 TECPR1Q7Z6L1 1165 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 ADIPOR2Q86V24 386 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 LRRC56Q8IYG6 542 aaPredicted RBP13.39□□□□□ -0.27
CLPB-209ENST00000538039 AMER3Q8N944 861 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 TP53I13Q8NBR0 393 aaPredicted RBP13.39□□□□□ -0.27
CLPB-209ENST00000538039 FAM46DQ8NEK8 389 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 TMEM246Q9BRR3 403 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 CPEB1Q9BZB8 566 aaKnown RBP13.39□□□□□ -0.27
CLPB-209ENST00000538039 HCFC1R1Q9NWW0 138 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 CNOT2Q9NZN8 540 aaKnown RBP13.39□□□□□ -0.27
CLPB-209ENST00000538039 CORO2BQ9UQ03 480 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 PRKAB1Q9Y478 270 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 RANBP2P49792 3224 aaKnown RBP13.39□□□□□ -0.27
CLPB-209ENST00000538039 NEDD8-MDP1E9PL57 170 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 DVL2O14641 736 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 PPM1DO15297 605 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 NME6O75414 186 aaPredicted RBP13.39□□□□□ -0.27
CLPB-209ENST00000538039 POP4O95707 220 aaKnown RBP13.39□□□□□ -0.27
CLPB-209ENST00000538039 OR12D1P0DN82 309 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 PPIBP23284 216 aaKnown RBP13.39□□□□□ -0.27
CLPB-209ENST00000538039 GAS1P54826 345 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 OLR1P78380 273 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 TMEM115Q12893 351 aaPredicted RBP13.39□□□□□ -0.27
CLPB-209ENST00000538039 SYTL3Q4VX76 610 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 SLX4IPQ5VYV7 408 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 ACSM5Q6NUN0 579 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 DEF8Q6ZN54 512 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 NANOGP1Q8N7R0 232 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 ZFP41Q8N8Y5 198 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 TMEM159Q96B96 161 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 VWCEQ96DN2 955 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 PHOX2BQ99453 314 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 TM9SF2Q99805 663 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 TSSK6Q9BXA6 273 aa13.39□□□□□ -0.27
CLPB-209ENST00000538039 POLR2J2Q9GZM3 115 aaKnown RBP13.39□□□□□ -0.27
CLPB-209ENST00000538039 MOV10Q9HCE1 1003 aaKnown RBP13.39□□□□□ -0.27
CLPB-209ENST00000538039 TEX28O15482 410 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 EPPINO95925 133 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 SOD2P04179 222 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 CD72P21854 359 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 KIR2DL3P43628 341 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 MESP2Q0VG99 397 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 PGBD2Q6P3X8 592 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 TMPRSS11AQ6ZMR5 421 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 TMC8Q8IU68 726 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 VN1R2Q8NFZ6 395 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 BTN2A2Q8WVV5 523 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 TMEM19Q96HH6 336 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 MAPKAP1Q9BPZ7 522 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 CCDC32Q9BV29 185 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 MRPL17Q9NRX2 175 aaKnown RBP13.38□□□□□ -0.27
CLPB-209ENST00000538039 TXNL4BQ9NX01 149 aaKnown RBP13.38□□□□□ -0.27
CLPB-209ENST00000538039 KIF26AQ9ULI4 1882 aaPredicted RBP13.38□□□□□ -0.27
CLPB-209ENST00000538039 SH3D21A4FU49 640 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 ANTXRLA6NF34 631 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 ZNF670-ZNF695F2Z2N8 137 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 H3BN98 237 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 TLX2O43763 284 aaPredicted RBP13.38□□□□□ -0.27
CLPB-209ENST00000538039 APOA1P02647 267 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 HSD3B1P14060 373 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 HSD3B2P26439 372 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 WEE1P30291 646 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 CSTF2P33240 577 aaKnown RBP eCLIP13.38□□□□□ -0.27
CLPB-209ENST00000538039 DEFA1P59665 94 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 DEFA3P59666 94 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 TEKQ02763 1124 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 HNRNPA0Q13151 305 aaKnown RBP13.38□□□□□ -0.27
CLPB-209ENST00000538039 ZNF544Q6NX49 715 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 C11orf74Q86VG3 221 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 CFAP206Q8IYR0 622 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 ZNF717Q9BY31 904 aaPredicted RBP13.38□□□□□ -0.27
CLPB-209ENST00000538039 PLA2G12AQ9BZM1 189 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 C3orf14Q9HBI5 128 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 TVP23BQ9NYZ1 205 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 A0A1W2PQL4 384 aaPredicted RBP13.38□□□□□ -0.27
CLPB-209ENST00000538039 SHISA3A0PJX4 238 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 M0R3H8 397 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 OR10H3O60404 316 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 UGT2B17O75795 530 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 SOD1P00441 154 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 IFNW1P05000 195 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 OSMP13725 252 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 DSTNP60981 165 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 TAP2Q03519 686 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 KCNC3Q14003 757 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 CDK10Q15131 360 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 TOR1AIP1Q5JTV8 583 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 ARMC4Q5T2S8 1044 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 OXR1Q8N573 874 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 OR9Q1Q8NGQ5 310 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 FUZQ9BT04 418 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 TMEM39AQ9NV64 488 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 NDUFB11Q9NX14 153 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 KLHL20Q9Y2M5 609 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 KCNE2Q9Y6J6 123 aa13.38□□□□□ -0.27
CLPB-209ENST00000538039 B4DXG7 233 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 SCO2O43819 266 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms