RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 CAMKMTQ7Z624 323 aa22.78■■□□□ 1.24
HMGA2-208ENST00000537429 GLB1L3Q8NCI6 653 aaPredicted RBP22.78■■□□□ 1.24
HMGA2-208ENST00000537429 OR7A2PQ8NGA2 310 aa22.78■■□□□ 1.24
HMGA2-208ENST00000537429 FGF11Q92914 225 aa22.78■■□□□ 1.24
HMGA2-208ENST00000537429 ANKRD9Q96BM1 317 aaPredicted RBP22.78■■□□□ 1.24
HMGA2-208ENST00000537429 COQ8BQ96D53 544 aa22.78■■□□□ 1.24
HMGA2-208ENST00000537429 GPR87Q9BY21 358 aa22.78■■□□□ 1.24
HMGA2-208ENST00000537429 VN1R1Q9GZP7 353 aa22.78■■□□□ 1.24
HMGA2-208ENST00000537429 TMEM45AQ9NWC5 275 aa22.78■■□□□ 1.24
HMGA2-208ENST00000537429 UTS2RQ9UKP6 389 aa22.78■■□□□ 1.24
HMGA2-208ENST00000537429 FGF17O60258 216 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 COX7A2P14406 83 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 PPP2R1BP30154 601 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 DLSTP36957 453 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 PCBP4P57723 403 aaKnown RBP22.77■■□□□ 1.24
HMGA2-208ENST00000537429 RPS15P62841 145 aaKnown RBP22.77■■□□□ 1.24
HMGA2-208ENST00000537429 FOLH1Q04609 750 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 SLC13A2Q13183 592 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 DNASE1L3Q13609 305 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 UBAP2LQ14157 1087 aaKnown RBP22.77■■□□□ 1.24
HMGA2-208ENST00000537429 ZNF385BQ569K4 471 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 FUNDC1Q8IVP5 155 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 PLPP5Q8NEB5 264 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 OR2Y1Q8NGV0 311 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 PPCDCQ96CD2 204 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 NAF1Q96HR8 494 aaKnown RBP22.77■■□□□ 1.24
HMGA2-208ENST00000537429 PRPF18Q99633 342 aaKnown RBP22.77■■□□□ 1.24
HMGA2-208ENST00000537429 MYLK2Q9H1R3 596 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 CCDC167Q9P0B6 97 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 SH3BP4Q9P0V3 963 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 PADI2Q9Y2J8 665 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 IDSB3KWA1 339 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 TGFBR3LH3BV60 316 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 GPR75O95800 540 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 MAOAP21397 527 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 F8A1P23610 371 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 ADSLP30566 484 aaPredicted RBP22.77■■□□□ 1.24
HMGA2-208ENST00000537429 OR4N5Q8IXE1 308 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 OR4K14Q8NGD5 310 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 PTCHD1Q96NR3 888 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 CCDC86Q9H6F5 360 aaKnown RBP22.77■■□□□ 1.24
HMGA2-208ENST00000537429 SLC35C2Q9NQQ7 365 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 NECTIN3Q9NQS3 549 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 DKK4Q9UBT3 224 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 TCFL5Q9UL49 500 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 PTRH2Q9Y3E5 179 aaKnown RBP22.77■■□□□ 1.24
HMGA2-208ENST00000537429 PCDHGA6Q9Y5G7 932 aa22.77■■□□□ 1.24
HMGA2-208ENST00000537429 CACNA1AO00555 2505 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 IGKV3D-11A0A0A0MRZ8 115 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 C9JVG2 144 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 ERAL1O75616 437 aaKnown RBP22.76■■□□□ 1.23
HMGA2-208ENST00000537429 DCTN3O75935 186 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 CYC1P08574 325 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 PTPN4P29074 926 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 IGLV3-21P80748 117 aaPredicted RBP22.76■■□□□ 1.23
HMGA2-208ENST00000537429 SRSF11Q05519 484 aaKnown RBP22.76■■□□□ 1.23
HMGA2-208ENST00000537429 KLF10Q13118 480 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 MPEG1Q2M385 716 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 DPY19L1Q2PZI1 675 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 CPTPQ5TA50 214 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 FAM69BQ5VUD6 431 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 FAM180BQ6P0A1 224 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 OR8J2Q8NGG1 315 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 KIAA1143Q96AT1 154 aaPredicted RBP22.76■■□□□ 1.23
HMGA2-208ENST00000537429 EXOSC8Q96B26 276 aaKnown RBP22.76■■□□□ 1.23
HMGA2-208ENST00000537429 KLHL29Q96CT2 875 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 CNRIP1Q96F85 164 aaPredicted RBP22.76■■□□□ 1.23
HMGA2-208ENST00000537429 ZNF681Q96N22 645 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 ZBTB18Q99592 522 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 CRB3Q9BUF7 120 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 ARMCX1Q9P291 453 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 C3orf18Q9UK00 162 aa22.76■■□□□ 1.23
HMGA2-208ENST00000537429 FAM234BA2RU67 622 aa22.75■■□□□ 1.23
HMGA2-208ENST00000537429 HEXBP07686 556 aa22.75■■□□□ 1.23
HMGA2-208ENST00000537429 UMODP07911 640 aa22.75■■□□□ 1.23
HMGA2-208ENST00000537429 LAMP1P11279 417 aa22.75■■□□□ 1.23
HMGA2-208ENST00000537429 CD1EP15812 388 aa22.75■■□□□ 1.23
HMGA2-208ENST00000537429 PIK3R1P27986 724 aa22.75■■□□□ 1.23
HMGA2-208ENST00000537429 POLR2JP52435 117 aaKnown RBP22.75■■□□□ 1.23
HMGA2-208ENST00000537429 EMP2P54851 167 aa22.75■■□□□ 1.23
HMGA2-208ENST00000537429 ID2Q02363 134 aa22.75■■□□□ 1.23
HMGA2-208ENST00000537429 CEBPEQ15744 281 aa22.75■■□□□ 1.23
HMGA2-208ENST00000537429 AGKQ53H12 422 aa22.75■■□□□ 1.23
HMGA2-208ENST00000537429 SPANXN4Q5MJ08 99 aa22.75■■□□□ 1.23
HMGA2-208ENST00000537429 GATA6Q92908 595 aa22.75■■□□□ 1.23
HMGA2-208ENST00000537429 GPN2Q9H9Y4 310 aaPredicted RBP22.75■■□□□ 1.23
HMGA2-208ENST00000537429 ATAD3AQ9NVI7 634 aa22.75■■□□□ 1.23
HMGA2-208ENST00000537429 KCND3Q9UK17 655 aa22.75■■□□□ 1.23
HMGA2-208ENST00000537429 CROCCQ5TZA2 2017 aa22.75■■□□□ 1.23
HMGA2-208ENST00000537429 A0A1W2PS29 197 aa22.74■■□□□ 1.23
HMGA2-208ENST00000537429 SLC22A2O15244 555 aa22.74■■□□□ 1.23
HMGA2-208ENST00000537429 DDX5P17844 614 aaKnown RBP22.74■■□□□ 1.23
HMGA2-208ENST00000537429 XKP51811 444 aa22.74■■□□□ 1.23
HMGA2-208ENST00000537429 RPS18P62269 152 aaKnown RBP22.74■■□□□ 1.23
HMGA2-208ENST00000537429 STX4Q12846 297 aa22.74■■□□□ 1.23
HMGA2-208ENST00000537429 RCAN2Q14206 197 aa22.74■■□□□ 1.23
HMGA2-208ENST00000537429 PGS1Q32NB8 556 aa22.74■■□□□ 1.23
HMGA2-208ENST00000537429 FAM174BQ3ZCQ3 159 aa22.74■■□□□ 1.23
HMGA2-208ENST00000537429 BLOC1S3Q6QNY0 202 aa22.74■■□□□ 1.23
HMGA2-208ENST00000537429 TSLPQ969D9 159 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms