RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 CPN2P22792 545 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 SSTR1P30872 391 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 RPL21P46778 160 aaKnown RBP17■□□□□ 0.31
SSSCA1-206ENST00000531405 IST1P53990 364 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 LAPTM5Q13571 262 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 SLC10A1Q14973 349 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 HYAL4Q2M3T9 481 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 PIGGQ5H8A4 983 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 PAGE2BQ5JRK9 111 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 C1orf185Q5T7R7 199 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 PRAMEF20Q5VT98 475 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 ADGRD1Q6QNK2 874 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 CREG2Q8IUH2 290 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 C9orf40Q8IXQ3 194 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 RNF175Q8N4F7 328 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 PDPRQ8NCN5 879 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 PPWD1Q96BP3 646 aaKnown RBP17■□□□□ 0.31
SSSCA1-206ENST00000531405 TBCDQ9BTW9 1192 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 ROGDIQ9GZN7 287 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 SNX24Q9Y343 169 aa17■□□□□ 0.31
SSSCA1-206ENST00000531405 SEC23IPQ9Y6Y8 1000 aaKnown RBP17■□□□□ 0.31
SSSCA1-206ENST00000531405 DOCK7Q96N67 2140 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 TRGV5A0A0B4J1U4 118 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 EFCAB8A8MWE9 144 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 ZSCAN12O43309 604 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 WDR1O75083 606 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 PRKRAO75569 313 aaKnown RBP16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 NADKO95544 446 aaPredicted RBP16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 RFPL3SP0C7P2 107 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 SSR2P43308 183 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 STT3AP46977 705 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 MRPS25P82663 173 aaKnown RBP16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 HIST2H2ACQ16777 129 aaPredicted RBP16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 MPEG1Q2M385 716 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 AP5B1Q2VPB7 878 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 ZNF791Q3KP31 576 aaPredicted RBP16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 CDKL4Q5MAI5 379 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 WLSQ5T9L3 541 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 HIST2H2AA3Q6FI13 130 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 WDR53Q7Z5U6 358 aaPredicted RBP16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 ZZZ3Q8IYH5 903 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 SRFBP1Q8NEF9 429 aaKnown RBP16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 SARAFQ96BY9 339 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 TSPAN17Q96FV3 270 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 SENP5Q96HI0 755 aaPredicted RBP16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 DGAT2Q96PD7 388 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 KRT12Q99456 494 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 SH2D2AQ9NP31 389 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 DNAJB12Q9NXW2 375 aaKnown RBP16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 RNF112Q9ULX5 631 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 SPACA6W5XKT8 324 aa16.99■□□□□ 0.31
SSSCA1-206ENST00000531405 MED12Q93074 2177 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 SCELO95171 688 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 LRATO95237 230 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 S100BP04271 92 aaPredicted RBP16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 IGKV3-11P04433 115 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 COX7A2P14406 83 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 STMN1P16949 149 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 ATP6V0D1P61421 351 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 KCNJ2P63252 427 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 IGLV3-21P80748 117 aaPredicted RBP16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 TBCCQ15814 346 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 SLC22A10Q63ZE4 541 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 C18orf63Q68DL7 685 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 LYPD8Q6UX82 237 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 NUBPLQ8TB37 319 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 GPR22Q99680 433 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 RBBP8Q99708 897 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 CD244Q9BZW8 370 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 PHACTR1Q9C0D0 580 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 OR51B5Q9H339 312 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 LIME1Q9H400 295 aa16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 ZNF703Q9H7S9 590 aaPredicted RBP16.98■□□□□ 0.31
SSSCA1-206ENST00000531405 HCN1O60741 890 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 CASP2P42575 452 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 FOLH1Q04609 750 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 SLAMF1Q13291 335 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 DDX39BQ13838 428 aaKnown RBP16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 E2F2Q14209 437 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 TMEM35AQ53FP2 167 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 KHDRBS2Q5VWX1 349 aaKnown RBP16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 MED27Q6P2C8 311 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 ARSKQ6UWY0 536 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 LRRC70Q7Z2Q7 622 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 LAS2Q8IYD9 372 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 BBOF1Q8ND07 529 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 FAM13CQ8NE31 585 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 MYRIPQ8NFW9 859 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 OR7G3Q8NG95 312 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 SLC22A8Q8TCC7 542 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 PAQR8Q8TEZ7 354 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 PYROXD1Q8WU10 500 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 SPACA9Q96E40 222 aaPredicted RBP16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 UBXN10Q96LJ8 280 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 SLC6A15Q9H2J7 730 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 ALG9Q9H6U8 611 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 PROK2Q9HC23 129 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 SLC24A3Q9HC58 644 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 SAYSD1Q9NPB0 183 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 CCM2LQ9NUG4 571 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms