RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-206ENST00000527902 POLR3HQ9Y535 204 aaPredicted RBP16.64■□□□□ 0.25
NXF1-206ENST00000527902 SAGE2PA6NJ88 616 aa16.63■□□□□ 0.25
NXF1-206ENST00000527902 SLC28A1O00337 649 aa16.63■□□□□ 0.25
NXF1-206ENST00000527902 SKAP2O75563 359 aaPredicted RBP16.63■□□□□ 0.25
NXF1-206ENST00000527902 MYO1DO94832 1006 aa16.63■□□□□ 0.25
NXF1-206ENST00000527902 CHEK2O96017 543 aa16.63■□□□□ 0.25
NXF1-206ENST00000527902 PRB1P04280 392 aa16.63■□□□□ 0.25
NXF1-206ENST00000527902 TLX1P31314 330 aaPredicted RBP16.63■□□□□ 0.25
NXF1-206ENST00000527902 STX4Q12846 297 aa16.63■□□□□ 0.25
NXF1-206ENST00000527902 BTBD16Q32M84 506 aa16.63■□□□□ 0.25
NXF1-206ENST00000527902 TCTN3Q6NUS6 607 aa16.63■□□□□ 0.25
NXF1-206ENST00000527902 DGAT2L6Q6ZPD8 337 aa16.63■□□□□ 0.25
NXF1-206ENST00000527902 DDIASQ8IXT1 998 aa16.63■□□□□ 0.25
NXF1-206ENST00000527902 LSM14AQ8ND56 463 aaKnown RBP16.63■□□□□ 0.25
NXF1-206ENST00000527902 DNAJB14Q8TBM8 379 aa16.63■□□□□ 0.25
NXF1-206ENST00000527902 BRIX1Q8TDN6 353 aaKnown RBP16.63■□□□□ 0.25
NXF1-206ENST00000527902 TANKQ92844 425 aa16.63■□□□□ 0.25
NXF1-206ENST00000527902 LHPPQ9H008 270 aa16.63■□□□□ 0.25
NXF1-206ENST00000527902 ZBTB20Q9HC78 741 aaPredicted RBP16.63■□□□□ 0.25
NXF1-206ENST00000527902 C5AR2Q9P296 337 aa16.63■□□□□ 0.25
NXF1-206ENST00000527902 HEY2Q9UBP5 337 aa16.63■□□□□ 0.25
NXF1-206ENST00000527902 HAO1Q9UJM8 370 aa16.63■□□□□ 0.25
NXF1-206ENST00000527902 RAP2CQ9Y3L5 183 aa16.63■□□□□ 0.25
NXF1-206ENST00000527902 PCDHA9Q9Y5H5 950 aa16.63■□□□□ 0.25
NXF1-206ENST00000527902 GNG14A0A1W2PPG7 69 aa16.62■□□□□ 0.25
NXF1-206ENST00000527902 LSM1O15116 133 aaKnown RBP16.62■□□□□ 0.25
NXF1-206ENST00000527902 RGS14O43566 566 aa16.62■□□□□ 0.25
NXF1-206ENST00000527902 SNNO75324 88 aaPredicted RBP16.62■□□□□ 0.25
NXF1-206ENST00000527902 IL3P08700 152 aa16.62■□□□□ 0.25
NXF1-206ENST00000527902 TAS2R50P59544 299 aa16.62■□□□□ 0.25
NXF1-206ENST00000527902 TRA2BP62995 288 aaKnown RBP16.62■□□□□ 0.25
NXF1-206ENST00000527902 NR6A1Q15406 480 aa16.62■□□□□ 0.25
NXF1-206ENST00000527902 OR52E8Q6IFG1 317 aa16.62■□□□□ 0.25
NXF1-206ENST00000527902 KIF2BQ8N4N8 673 aa16.62■□□□□ 0.25
NXF1-206ENST00000527902 C16orf78Q8WTQ4 265 aa16.62■□□□□ 0.25
NXF1-206ENST00000527902 PTPMT1Q8WUK0 201 aaPredicted RBP16.62■□□□□ 0.25
NXF1-206ENST00000527902 FCRL1Q96LA6 429 aa16.62■□□□□ 0.25
NXF1-206ENST00000527902 SMAD5Q99717 465 aaKnown RBP16.62■□□□□ 0.25
NXF1-206ENST00000527902 SLC25A18Q9H1K4 315 aa16.62■□□□□ 0.25
NXF1-206ENST00000527902 LRTM1Q9HBL6 345 aa16.62■□□□□ 0.25
NXF1-206ENST00000527902 ADAP2Q9NPF8 381 aa16.62■□□□□ 0.25
NXF1-206ENST00000527902 PNPOQ9NVS9 261 aa16.62■□□□□ 0.25
NXF1-206ENST00000527902 C1orf109Q9NX04 203 aa16.62■□□□□ 0.25
NXF1-206ENST00000527902 VTI1BQ9UEU0 232 aa16.62■□□□□ 0.25
NXF1-206ENST00000527902 CES1P1Q9UKY3 287 aa16.62■□□□□ 0.25
NXF1-206ENST00000527902 DLGAP4Q9Y2H0 992 aa16.62■□□□□ 0.25
NXF1-206ENST00000527902 ATP6AP2A0A1C7CYW4 349 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 SEC22BO75396 215 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 ATP6AP2O75787 350 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 GPR75O95800 540 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 IFNA16P05015 189 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 ANXA4P09525 319 aaPredicted RBP16.61■□□□□ 0.25
NXF1-206ENST00000527902 TACR1P25103 407 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 SOX11P35716 441 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 GPR143P51810 404 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 PGDP52209 483 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 PPP2R2AP63151 447 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 SERTAD2Q14140 314 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 ELAVL1Q15717 326 aaKnown RBP16.61■□□□□ 0.25
NXF1-206ENST00000527902 EXT1Q16394 746 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 ZNF750Q32MQ0 723 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 RFTN2Q52LD8 501 aaPredicted RBP16.61■□□□□ 0.25
NXF1-206ENST00000527902 LACTB2Q53H82 288 aaPredicted RBP16.61■□□□□ 0.25
NXF1-206ENST00000527902 VWA5B1Q5TIE3 1220 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 B3GNTL1Q67FW5 361 aaPredicted RBP16.61■□□□□ 0.25
NXF1-206ENST00000527902 NOXRED1Q6NXP6 359 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 SIRT6Q8N6T7 355 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.61■□□□□ 0.258e-29■■■■■ 62
NXF1-206ENST00000527902 M1APQ8TC57 530 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 ELP5Q8TE02 316 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 PPWD1Q96BP3 646 aaKnown RBP16.61■□□□□ 0.25
NXF1-206ENST00000527902 ILKAPQ9H0C8 392 aaPredicted RBP16.61■□□□□ 0.25
NXF1-206ENST00000527902 MANSC1Q9H8J5 431 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 WDR41Q9HAD4 459 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 MMP25Q9NPA2 562 aa16.61■□□□□ 0.25
NXF1-206ENST00000527902 ZNF223Q9UK11 482 aaPredicted RBP16.61■□□□□ 0.25
NXF1-206ENST00000527902 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.61■□□□□ 0.25
NXF1-206ENST00000527902 C1orf226A1L170 272 aa16.6■□□□□ 0.25
NXF1-206ENST00000527902 C1QL1O75973 258 aa16.6■□□□□ 0.25
NXF1-206ENST00000527902 ICAM2P13598 275 aa16.6■□□□□ 0.25
NXF1-206ENST00000527902 STT3AP46977 705 aa16.6■□□□□ 0.25
NXF1-206ENST00000527902 CD97P48960 835 aa16.6■□□□□ 0.25
NXF1-206ENST00000527902 RPL14P50914 215 aaKnown RBP16.6■□□□□ 0.25
NXF1-206ENST00000527902 RPL38P63173 70 aaKnown RBP16.6■□□□□ 0.25
NXF1-206ENST00000527902 OCRLQ01968 901 aa16.6■□□□□ 0.25
NXF1-206ENST00000527902 ZNF763Q0D2J5 394 aa16.6■□□□□ 0.25
NXF1-206ENST00000527902 TERF2Q15554 542 aa16.6■□□□□ 0.25
NXF1-206ENST00000527902 PDCD2Q16342 344 aaPredicted RBP16.6■□□□□ 0.25
NXF1-206ENST00000527902 GALNTL6Q49A17 601 aa16.6■□□□□ 0.25
NXF1-206ENST00000527902 FAM180BQ6P0A1 224 aa16.6■□□□□ 0.25
NXF1-206ENST00000527902 SLC48A1Q6P1K1 146 aa16.6■□□□□ 0.25
NXF1-206ENST00000527902 ASB18Q6ZVZ8 466 aa16.6■□□□□ 0.25
NXF1-206ENST00000527902 ZNF321PQ8N8H1 164 aa16.6■□□□□ 0.25
NXF1-206ENST00000527902 APCDD1LQ8NCL9 501 aa16.6■□□□□ 0.25
NXF1-206ENST00000527902 RAB3IL1Q8TBN0 382 aa16.6■□□□□ 0.25
NXF1-206ENST00000527902 DOK4Q8TEW6 326 aa16.6■□□□□ 0.25
NXF1-206ENST00000527902 NPAS2Q99743 824 aa16.6■□□□□ 0.25
NXF1-206ENST00000527902 PTGFRNQ9P2B2 879 aa16.6■□□□□ 0.25
NXF1-206ENST00000527902 PPIEQ9UNP9 301 aaKnown RBP16.6■□□□□ 0.25
NXF1-206ENST00000527902 EXO1Q9UQ84 846 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms