RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 L3MBTL4Q8NA19 623 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 OR7G3Q8NG95 312 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 OR9A4Q8NGU2 314 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 HUS1BQ8NHY5 278 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 NT5CQ8TCD5 201 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PROKR1Q8TCW9 393 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 UTP15Q8TED0 518 aaKnown RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CREB3L4Q8TEY5 395 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ZNF473Q8WTR7 871 aaKnown RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CT55Q8WUE5 264 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SELENOMQ8WWX9 145 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TLCD1Q96CP7 247 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 FAR2Q96K12 515 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CNDP1Q96KN2 507 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PKNOX2Q96KN3 472 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 F2RL3Q96RI0 385 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CCNL2Q96S94 520 aaPredicted RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MTERF1Q99551 399 aaKnown RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 EFHD1Q9BUP0 239 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 GATA5Q9BWX5 397 aaPredicted RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 GPR87Q9BY21 358 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 DPH1Q9BZG8 443 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SHCBP1LQ9BZQ2 653 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 REXO4Q9GZR2 422 aaKnown RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 RHBGQ9H310 441 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ELOVL6Q9H5J4 265 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 EML4Q9HC35 981 aaKnown RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SLAMF8Q9P0V8 285 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 KCND3Q9UK17 655 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CROTQ9UKG9 612 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ACSL6Q9UKU0 697 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 FARSAQ9Y285 508 aaKnown RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MRPS2Q9Y399 296 aaKnown RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 BPTFQ12830 3046 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 HEATR5BQ9P2D3 2071 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 DCHS1Q96JQ0 3298 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 A0A0G2JN53 185 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 A0A1B0GTL3 188 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 LRIT2A6NDA9 550 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ZNF860A6NHJ4 632 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SAP18O00422 153 aaKnown RBP5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 UBFD1O14562 309 aaKnown RBP5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 NKX2-8O15522 239 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ERI3O43414 337 aaKnown RBP5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 FOXS1O43638 330 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 KLHL18O94889 574 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 NSA2O95478 260 aaKnown RBP5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ESRRBO95718 433 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CD63P08962 238 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CLEC2LP0C7M8 214 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ZNF888P0CJ79 500 aaPredicted RBP5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 LIFP15018 202 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PRKCAP17252 672 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 FBLP22087 321 aaKnown RBP5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ENPP1P22413 925 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 F8A1P23610 371 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 GSTM2P28161 218 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PTPN4P29074 926 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SERPINB3P29508 390 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 HMOX2P30519 316 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 STAT5AP42229 794 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ETV4P43268 484 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PKNOX1P55347 436 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 RPS13P62277 151 aaKnown RBP5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SKP1P63208 163 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 OLR1P78380 273 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MAT1AQ00266 395 aaKnown RBP5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TGM3Q08188 693 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TRAF3Q13114 568 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 DNASE1L3Q13609 305 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 E2F2Q14209 437 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ERV3-1Q14264 604 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 KIR3DS1Q14943 382 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 HERC3Q15034 1050 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CHI3L2Q15782 390 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 UGT8Q16880 541 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SYT16Q17RD7 645 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 AP5B1Q2VPB7 878 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TTMPQ5BVD1 217 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 VWA2Q5GFL6 755 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ARL13AQ5H913 290 aaPredicted RBP5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 DEPDC1Q5TB30 811 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 FAM219BQ5XKK7 198 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 FRG2Q64ET8 278 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TRIM40Q6P9F5 258 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SCIMPQ6UWF3 145 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ZCCHC23Q6ZST2 131 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ABHD13Q7L211 337 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CUZD1Q86UP6 607 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CXorf67Q86X51 503 aaPredicted RBP5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 LAS2Q8IYD9 372 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PRSS58Q8IYP2 241 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ENDOVQ8N8Q3 282 aaKnown RBP5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ANKS4BQ8N8V4 417 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SRFBP1Q8NEF9 429 aaKnown RBP5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 NUP43Q8NFH3 380 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 WDR20Q8TBZ3 569 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MS4A6EQ96DS6 147 aa5.48□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MVB12AQ96EY5 273 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms