RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 DAZLQ92904 295 aaKnown RBP6.69□□□□□ -1.34
USP46-208ENST00000512656 C14orf79Q96F83 325 aa6.69□□□□□ -1.34
USP46-208ENST00000512656 DMRTA2Q96SC8 542 aa6.69□□□□□ -1.34
USP46-208ENST00000512656 TRIM8Q9BZR9 551 aa6.69□□□□□ -1.34
USP46-208ENST00000512656 NT5DC2Q9H857 520 aa6.69□□□□□ -1.34
USP46-208ENST00000512656 CNOT10Q9H9A5 744 aaKnown RBP6.69□□□□□ -1.34
USP46-208ENST00000512656 POPDC3Q9HBV1 291 aa6.69□□□□□ -1.34
USP46-208ENST00000512656 NECTIN3Q9NQS3 549 aa6.69□□□□□ -1.34
USP46-208ENST00000512656 PRTFDC1Q9NRG1 225 aa6.69□□□□□ -1.34
USP46-208ENST00000512656 PNO1Q9NRX1 252 aaKnown RBP6.69□□□□□ -1.34
USP46-208ENST00000512656 GPATCH2Q9NW75 528 aa6.69□□□□□ -1.34
USP46-208ENST00000512656 SLC17A6Q9P2U8 582 aa6.69□□□□□ -1.34
USP46-208ENST00000512656 PPIEQ9UNP9 301 aaKnown RBP6.69□□□□□ -1.34
USP46-208ENST00000512656 ERVK-11Q9UQG0 969 aa6.69□□□□□ -1.34
USP46-208ENST00000512656 CHMP2BQ9UQN3 213 aa6.69□□□□□ -1.34
USP46-208ENST00000512656 YARS2Q9Y2Z4 477 aaKnown RBP6.69□□□□□ -1.34
USP46-208ENST00000512656 TEX264Q9Y6I9 313 aa6.69□□□□□ -1.34
USP46-208ENST00000512656 NIPBLQ6KC79 2804 aaeCLIP6.69□□□□□ -1.34
USP46-208ENST00000512656 CACNA1CQ13936 2221 aa6.69□□□□□ -1.34
USP46-208ENST00000512656 ITPR3Q14573 2671 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 ANKHD1Q8IWZ3 2542 aaKnown RBP6.68□□□□□ -1.34
USP46-208ENST00000512656 LRIT2A6NDA9 550 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 A8MVJ9 347 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 ACOT7O00154 380 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 CDC7O00311 574 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 CLGNO14967 610 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 CDC40O60508 579 aaKnown RBP eCLIP6.68□□□□□ -1.34
USP46-208ENST00000512656 DNAJB6O75190 326 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 ITGA10O75578 1167 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 CLEC3AO75596 197 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 TPOP07202 933 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 IVDP26440 423 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 PTGER1P34995 402 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 RAB38P57729 211 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 TAS2R39P59534 338 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 HSF1Q00613 529 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 POU4F1Q01851 419 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 SLC13A2Q13183 592 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 BMPR2Q13873 1038 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 EFTUD2Q15029 972 aaKnown RBP eCLIP6.68□□□□□ -1.34
USP46-208ENST00000512656 ELAVL1Q15717 326 aaKnown RBP6.68□□□□□ -1.34
USP46-208ENST00000512656 HIST2H2ACQ16777 129 aaPredicted RBP6.68□□□□□ -1.34
USP46-208ENST00000512656 PAGE2BQ5JRK9 111 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 CDKL4Q5MAI5 379 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 HIST2H2AA3Q6FI13 130 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 TRIM40Q6P9F5 258 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 MEX3BQ6ZN04 569 aaKnown RBP6.68□□□□□ -1.34
USP46-208ENST00000512656 ZC3HC1Q86WB0 502 aaKnown RBP6.68□□□□□ -1.34
USP46-208ENST00000512656 ZNF227Q86WZ6 799 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 SCUBE1Q8IWY4 988 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 KLHDC8AQ8IYD2 350 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 ZFP62Q8NB50 900 aaPredicted RBP6.68□□□□□ -1.34
USP46-208ENST00000512656 APCDD1LQ8NCL9 501 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 SRFBP1Q8NEF9 429 aaKnown RBP6.68□□□□□ -1.34
USP46-208ENST00000512656 OR2L5Q8NG80 312 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 C16orf52Q8NHV5 167 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 ASB15Q8WXK1 588 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 KIAA1191Q96A73 305 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 SDCCAG3Q96C92 435 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 RHBDF1Q96CC6 855 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 TSPAN17Q96FV3 270 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 PDLIM2Q96JY6 352 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 Q96M66 194 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 SERINC2Q96SA4 455 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 EFCAB11Q9BUY7 163 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 ROGDIQ9GZN7 287 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 DERL2Q9GZP9 239 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 REXO4Q9GZR2 422 aaKnown RBP6.68□□□□□ -1.34
USP46-208ENST00000512656 TP63Q9H3D4 680 aaPredicted RBP6.68□□□□□ -1.34
USP46-208ENST00000512656 RHOJQ9H4E5 214 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 EHD1Q9H4M9 534 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 KLHL31Q9H511 634 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 COPS7BQ9H9Q2 264 aaPredicted RBP6.68□□□□□ -1.34
USP46-208ENST00000512656 PLAC1Q9HBJ0 212 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 ADAP2Q9NPF8 381 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 DNAJC11Q9NVH1 559 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 HPF1Q9NWY4 346 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 GPRC5BQ9NZH0 403 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 SLAMF8Q9P0V8 285 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 TXNDC16Q9P2K2 825 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 ASB1Q9Y576 335 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 CLCA3PQ9Y6N3 262 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 SPACA6W5XKT8 324 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 GTF3C1Q12789 2109 aa6.68□□□□□ -1.34
USP46-208ENST00000512656 NCOA6Q14686 2063 aaPredicted RBP6.67□□□□□ -1.34
USP46-208ENST00000512656 A0A1B0GTH9 108 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 FAM221AA4D161 298 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 FOXO6A8MYZ6 492 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 CCDC188H7C350 402 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 C19orf84I3L1E1 186 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 ADAM10O14672 748 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 HS6ST1O60243 411 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 CTNSO60931 367 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 SEC31AO94979 1220 aaKnown RBP6.67□□□□□ -1.34
USP46-208ENST00000512656 BPNT1O95861 308 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 HPXP02790 462 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 S100BP04271 92 aaPredicted RBP6.67□□□□□ -1.34
USP46-208ENST00000512656 IFNA16P05015 189 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 CHRNB4P30926 498 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 GGT5P36269 586 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms