RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 KRTAP1-3Q8IUG1 177 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 CREG2Q8IUH2 290 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 KLHL7Q8IXQ5 586 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 PDIK1LQ8N165 341 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 LRRC25Q8N386 305 aaPredicted RBP12.31□□□□□ -0.44
DDX41-206ENST00000506965 PDPRQ8NCN5 879 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 TNIP2Q8NFZ5 429 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 TTLQ8NG68 377 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 OR10G3Q8NGC4 313 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 PAQR8Q8TEZ7 354 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 DAZLQ92904 295 aaKnown RBP12.31□□□□□ -0.44
DDX41-206ENST00000506965 SENP5Q96HI0 755 aaPredicted RBP12.31□□□□□ -0.44
DDX41-206ENST00000506965 NAP1L3Q99457 506 aaPredicted RBP12.31□□□□□ -0.44
DDX41-206ENST00000506965 KCNF1Q9H3M0 494 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 LYRM4Q9HD34 91 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 SACM1LQ9NTJ5 587 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 ST6GALNAC2Q9UJ37 374 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 CNOT11Q9UKZ1 510 aaKnown RBP12.31□□□□□ -0.44
DDX41-206ENST00000506965 PLEKHA6Q9Y2H5 1048 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 RPH3AQ9Y2J0 694 aaPredicted RBP12.31□□□□□ -0.44
DDX41-206ENST00000506965 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.31□□□□□ -0.44
DDX41-206ENST00000506965 TRGV5A0A0B4J1U4 118 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 A0A1W2PPR1 153 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 PABPN1LA6NDY0 278 aaKnown RBP12.3□□□□□ -0.44
DDX41-206ENST00000506965 FIGNL2A6NMB9 653 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 GOLGA6L6A8MZA4 724 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 CES2O00748 559 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 H2AFYO75367 372 aaKnown RBP12.3□□□□□ -0.44
DDX41-206ENST00000506965 TGFB1P01137 390 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 CCDC166P0CW27 439 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 KLK2P20151 261 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 HIST1H1TP22492 207 aaPredicted RBP12.3□□□□□ -0.44
DDX41-206ENST00000506965 GSTM2P28161 218 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 SSTR1P30872 391 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 SOX18P35713 384 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 MSH2P43246 934 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 MAN2A2P49641 1150 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 CBLBQ13191 982 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 CHIT1Q13231 466 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 SLC10A1Q14973 349 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 ZKSCAN8Q15776 578 aaPredicted RBP12.3□□□□□ -0.44
DDX41-206ENST00000506965 DCST1Q5T197 706 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 CES4AQ5XG92 561 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 FRA10AC1Q70Z53 315 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 WDR53Q7Z5U6 358 aaPredicted RBP12.3□□□□□ -0.44
DDX41-206ENST00000506965 LAS2Q8IYD9 372 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 ULK2Q8IYT8 1036 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 KRT78Q8N1N4 520 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 SNX31Q8N9S9 440 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 NTNG2Q96CW9 530 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 LRRC39Q96DD0 335 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 PTCD3Q96EY7 689 aaKnown RBP12.3□□□□□ -0.44
DDX41-206ENST00000506965 UBXN10Q96LJ8 280 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 TRIM31Q9BZY9 425 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 OR51B5Q9H339 312 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 POPDC3Q9HBV1 291 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 RASSF1Q9NS23 344 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 WWOXQ9NZC7 414 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 CBLCQ9ULV8 474 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 MRPS33Q9Y291 106 aaKnown RBP12.3□□□□□ -0.44
DDX41-206ENST00000506965 HEATR5AQ86XA9 2040 aa12.3□□□□□ -0.44
DDX41-206ENST00000506965 LRRC14BA6NHZ5 514 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 PLPP1O14494 284 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 WDR1O75083 606 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 STK16O75716 305 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 FAM155BO75949 473 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 ZWINTO95229 277 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 CASP2P42575 452 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 STT3AP46977 705 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 TRPC1P48995 793 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 FOLH1Q04609 750 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 STX4Q12846 297 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 EFTUD2Q15029 972 aaKnown RBP eCLIP12.29□□□□□ -0.441e-6■■■■■ 28.2
DDX41-206ENST00000506965 PDK4Q16654 411 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 RIPPLY2Q5TAB7 128 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 DESI1Q6ICB0 168 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 PAOXQ6QHF9 649 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 OPN5Q6U736 354 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 CDC20BQ86Y33 519 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 GPSM1Q86YR5 675 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 ZNF441Q8N8Z8 693 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 BBOF1Q8ND07 529 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 OR7G3Q8NG95 312 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 GABPB2Q8TAK5 448 aaPredicted RBP12.29□□□□□ -0.44
DDX41-206ENST00000506965 NUBPLQ8TB37 319 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 EXT2Q93063 718 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 KIAA1191Q96A73 305 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 SPACA9Q96E40 222 aaPredicted RBP12.29□□□□□ -0.44
DDX41-206ENST00000506965 SGCZQ96LD1 299 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 RUNDC3BQ96NL0 473 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 KCNC2Q96PR1 638 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 GPR22Q99680 433 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 SMR3AQ99954 134 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 POLDIP3Q9BY77 421 aaKnown RBP12.29□□□□□ -0.44
DDX41-206ENST00000506965 PITHD1Q9GZP4 211 aaPredicted RBP12.29□□□□□ -0.44
DDX41-206ENST00000506965 DMRT3Q9NQL9 472 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 ALKBH4Q9NXW9 302 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 ACAD8Q9UKU7 415 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 ZANQ9Y493 2812 aa12.29□□□□□ -0.44
DDX41-206ENST00000506965 ABCA2Q9BZC7 2435 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms